GRichard513
commited on
Commit
·
28602d6
1
Parent(s):
aaa5f15
fix: add option to use corrected dataset
Browse files
multi_omics_transcript_expression.py
CHANGED
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@@ -306,8 +306,8 @@ class TranscriptExpressionHandler(GenomicLRATaskHandler):
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"transcript_expression/GTEx_v1_multiomics.csv"
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)
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elif self.expression_method == "read_counts":
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-
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-
"
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)
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return super().split_generators(dl_manager, cache_dir_root)
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"transcript_expression/GTEx_v1_multiomics.csv"
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)
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elif self.expression_method == "read_counts":
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+
self.df_csv_file = dl_manager.download_and_extract(
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"transcript_expression/GTEx_read_counts_multiomics.csv"
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)
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return super().split_generators(dl_manager, cache_dir_root)
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