Commit
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4aa5277
1
Parent(s):
796edd4
fix
Browse files
multi_omics_transcript_expression.py
CHANGED
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@@ -220,7 +220,7 @@ class TranscriptExpressionHandler(GenomicLRATaskHandler):
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start = coordinates_row["position"] - 1 # -1 since vcf coords are 1-based
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chromosome = coordinates_row["chr"]
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-
labels_row = coordinates_row.
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padded_sequence = pad_sequence(
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chromosome=self.reference_genome[chromosome],
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start=start,
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start = coordinates_row["position"] - 1 # -1 since vcf coords are 1-based
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chromosome = coordinates_row["chr"]
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+
labels_row = coordinates_row.iloc[idx].values[2:]
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padded_sequence = pad_sequence(
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chromosome=self.reference_genome[chromosome],
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start=start,
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