### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
if (p_editor->has_main_screen()) {
		
		
		for (int i = singleton->main_editor_buttons.size() - 1; i >= 0; i--) {
			if (p_editor->get_name() == singleton->main_editor_buttons[i]->get_text()) {
				if (singleton->main_editor_buttons[i]->is_pressed()) {
					singleton->editor_select(EDITOR_SCRIPT);
				}
				memdelete(singleton->main_editor_buttons[i]);
				singleton->main_editor_buttons.remove_at(i);
				break;