### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
immediate_dialog_confirmed = true;
}
bool EditorNode::immediate_confirmation_dialog(const String &p_text, const String &p_ok_text, const String &p_cancel_text) {
	ConfirmationDialog *cd = memnew(ConfirmationDialog);
	cd->set_text(p_text);
	cd->set_ok_button_text(p_ok_text);
	cd->set_cancel_button_text(p_cancel_text);
	cd->connect("confirmed", callable_mp(singleton, &EditorNode::_immediate_dialog_confirmed));
	singleton->gui_base->add_child(cd);
	cd->popup_centered();
	while (true) {
		OS::get_singleton()->delay_usec(1);
		DisplayServer::get_singleton()->process_events();
		Main::iteration();
		if (singleton->immediate_dialog_confirmed || !cd->is_visible()) {
			break;
		}
	}
	memdelete(cd);
	return singleton->immediate_dialog_confirmed;
}
void EditorNode::cleanup() {
	_init_callbacks.clear();
}
int EditorNode::get_current_tab() {
	return scene_tabs->get_current_tab();
}
void EditorNode::set_current_tab(int p_tab) {