### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
err = platform->export_pack(export_preset, export_defer.debug, export_path);
					}
				} else { 
					String config_error;
					bool missing_templates;
					if (!platform->can_export(export_preset, config_error, missing_templates, export_defer.debug)) {
						ERR_PRINT(vformat("Cannot export project with preset \"%s\" due to configuration errors:\n%s", preset_name, config_error));
						err = missing_templates ? ERR_FILE_NOT_FOUND : ERR_UNCONFIGURED;
					} else {
						platform->clear_messages();
						err = platform->export_project(export_preset, export_defer.debug, export_path);
					}
				}
				if (err != OK) {
					export_error = vformat("Project export for preset \"%s\" failed.", preset_name);
				} else if (platform->get_worst_message_type() >= EditorExportPlatform::EXPORT_MESSAGE_WARNING) {
					export_error = vformat("Project export for preset \"%s\" completed with warnings.", preset_name);
				}
			}
		}
		if (err != OK) {
			ERR_PRINT(export_error);
			_exit_editor(EXIT_FAILURE);
		} else if (!export_error.is_empty()) {
			WARN_PRINT(export_error);
		}
		_exit_editor(EXIT_SUCCESS);
	}
}
void EditorNode::_resources_reimported(const Vector<String> &p_resources) {