### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
Vector2 mouse_offset = (Vector2(tile_set_atlas_source->get_tile_size_in_atlas(drag_current_tile)) / 2.0 - Vector2(0.5, 0.5)) * tile_set->get_tile_size();
				Vector2i coords = tile_atlas_view->get_atlas_tile_coords_at_pos(tile_atlas_control->get_local_mouse_position() - mouse_offset);
				if (drag_current_tile != coords && tile_set_atlas_source->has_room_for_tile(coords, tile_set_atlas_source->get_tile_size_in_atlas(drag_current_tile), tile_set_atlas_source->get_tile_animation_columns(drag_current_tile), tile_set_atlas_source->get_tile_animation_separation(drag_current_tile), tile_set_atlas_source->get_tile_animation_frames_count(drag_current_tile), drag_current_tile)) {
					tile_set_atlas_source->move_tile_in_atlas(drag_current_tile, coords);
					selection.clear();
					selection.insert({ coords, 0 });
					drag_current_tile = coords;
					
					tile_set_changed_needs_update = false;
					_update_tile_inspector();
					_update_atlas_view();
					_update_tile_id_label();
					_update_current_tile_data_editor();
				}
			} else if (drag_type == DRAG_TYPE_MAY_POPUP_MENU) {
				if (Vector2(drag_start_mouse_pos).distance_to(tile_atlas_control->get_local_mouse_position()) > 5.0 * EDSCALE) {
					drag_type = DRAG_TYPE_NONE;
				}
			} else if (drag_type >= DRAG_TYPE_RESIZE_TOP_LEFT && drag_type <= DRAG_TYPE_RESIZE_LEFT) {
				
				new_base_tiles_coords = new_base_tiles_coords.max(Vector2i(-1, -1)).min(grid_size);
				Rect2i old_rect = Rect2i(drag_current_tile, tile_set_atlas_source->get_tile_size_in_atlas(drag_current_tile));
				Rect2i new_rect = old_rect;
				if (drag_type == DRAG_TYPE_RESIZE_LEFT || drag_type == DRAG_TYPE_RESIZE_TOP_LEFT || drag_type == DRAG_TYPE_RESIZE_BOTTOM_LEFT) {
					new_rect.position.x = MIN(new_base_tiles_coords.x + 1, old_rect.get_end().x - 1);
					new_rect.size.x = old_rect.get_end().x - new_rect.position.x;
				}
				if (drag_type == DRAG_TYPE_RESIZE_TOP || drag_type == DRAG_TYPE_RESIZE_TOP_LEFT || drag_type == DRAG_TYPE_RESIZE_TOP_RIGHT) {
					new_rect.position.y = MIN(new_base_tiles_coords.y + 1, old_rect.get_end().y - 1);