### Godot version

3.5.2.stable, 4.0.1.stable

### System information

Arch Linux

### Issue description

When the `Show Hidden Files` property is enabled in the Editor Settings:
![image](https://user-images.githubusercontent.com/6501975/226908540-8e70e520-3dcd-46e4-beaf-103ac176c1de.png)
Any `FileDialog` nodes from the project will inherit this setting, and their `Show Hidden Files` property is set to true everytime the scene is re-opened:

https://user-images.githubusercontent.com/6501975/226909135-a8fafdf7-ca36-40aa-b69a-a7baf2d7ae4f.mp4


This occurs on 3.5.2 as well.

### Steps to reproduce

- Enable `Show Hidden Files` property in the Editor Settings:
    - Reload Godot for the bug to occur
- Create a FileDialog node, and set it's `Show Hidden Files` property to false
- Save and close the scene, and reopen it
- The `Show Hidden Files` property is reset to true.

### Minimal reproduction project

N/A
{
		
		Ref<ResourceImporterTexture> import_texture;
		import_texture.instantiate();
		ResourceFormatImporter::get_singleton()->add_importer(import_texture);
		Ref<ResourceImporterLayeredTexture> import_cubemap;
		import_cubemap.instantiate();
		import_cubemap->set_mode(ResourceImporterLayeredTexture::MODE_CUBEMAP);
		ResourceFormatImporter::get_singleton()->add_importer(import_cubemap);
		Ref<ResourceImporterLayeredTexture> import_array;
		import_array.instantiate();
		import_array->set_mode(ResourceImporterLayeredTexture::MODE_2D_ARRAY);
		ResourceFormatImporter::get_singleton()->add_importer(import_array);
		Ref<ResourceImporterLayeredTexture> import_cubemap_array;
		import_cubemap_array.instantiate();
		import_cubemap_array->set_mode(ResourceImporterLayeredTexture::MODE_CUBEMAP_ARRAY);
		ResourceFormatImporter::get_singleton()->add_importer(import_cubemap_array);
		Ref<ResourceImporterLayeredTexture> import_3d;
		import_3d.instantiate();
		import_3d->set_mode(ResourceImporterLayeredTexture::MODE_3D);
		ResourceFormatImporter::get_singleton()->add_importer(import_3d);
		Ref<ResourceImporterImage> import_image;
		import_image.instantiate();
		ResourceFormatImporter::get_singleton()->add_importer(import_image);
		Ref<ResourceImporterTextureAtlas> import_texture_atlas;
		import_texture_atlas.instantiate();
		ResourceFormatImporter::get_singleton()->add_importer(import_texture_atlas);
		Ref<ResourceImporterDynamicFont> import_font_data_dynamic;
		import_font_data_dynamic.instantiate();
		ResourceFormatImporter::get_singleton()->add_importer(import_font_data_dynamic);