### Godot version

4.1.beta (7b1387ff2)

### System information

Mageia 9, Linux

### Issue description

When opening an empty project in latest `master`, I get these errors:
```
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: get_scene_path (editor/scu/../editor_data.cpp:880)
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: check_and_update_scene (editor/scu/../editor_data.cpp:683)
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: set_edited_scene (editor/scu/../editor_data.cpp:745)
```

Possibly related to recent changes to restore past sessions, but there's nothing to restore in this case?

### Steps to reproduce

- Create a new project, edit it
- Quit to project manager
- Re-open the newly created project -> errors

### Minimal reproduction project

Empty project.
Control *v_spacer = memnew(Control);
	version_info_vbc->add_child(v_spacer);
	version_btn = memnew(LinkButton);
	version_btn->set_text(VERSION_FULL_CONFIG);
	String hash = String(VERSION_HASH);
	if (hash.length() != 0) {
		hash = " " + vformat("[%s]", hash.left(9));
	}
	
	version_btn->set_meta(META_TEXT_TO_COPY, "v" VERSION_FULL_BUILD + hash);
	
	version_btn->set_self_modulate(Color(1, 1, 1, 0.65));
	version_btn->set_underline_mode(LinkButton::UNDERLINE_MODE_ON_HOVER);
	version_btn->set_tooltip_text(TTR("Click to copy."));
	version_btn->connect("pressed", callable_mp(this, &EditorNode::_version_button_pressed));
	version_info_vbc->add_child(version_btn);
	
	Control *h_spacer = memnew(Control);
	bottom_panel_hb->add_child(h_spacer);
	bottom_panel_raise = memnew(Button);
	bottom_panel_raise->set_flat(true);
	bottom_panel_raise->set_icon(gui_base->get_theme_icon(SNAME("ExpandBottomDock"), SNAME("EditorIcons")));
	bottom_panel_raise->set_shortcut(ED_SHORTCUT_AND_COMMAND("editor/bottom_panel_expand", TTR("Expand Bottom Panel"), KeyModifierMask::SHIFT | Key::F12));
	bottom_panel_hb->add_child(bottom_panel_raise);
	bottom_panel_raise->hide();
	bottom_panel_raise->set_toggle_mode(true);
	bottom_panel_raise->connect("toggled", callable_mp(this, &EditorNode::_bottom_panel_raise_toggled));
	log = memnew(EditorLog);
	Button *output_button = add_bottom_panel_item(TTR("Output"), log);
	log->set_tool_button(output_button);