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***Bugsquad note:** This issue has been confirmed several times already. No need to confirm it further.*

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### Godot version

v4.0.2.stable.official [7a0977ce2]

### System information

Ubuntu 22.04

### Issue description

I followed this tutorial
https://docs.godotengine.org/en/stable/tutorials/export/android_custom_build.html#doc-android-custom-build.

I want to create Android launcher app to do this i added following code to AndroidManifest.xml in Android Studio.
`<category android:name="android.intent.category.HOME" />
<category android:name="android.intent.category.DEFAULT" />`

But when I export APK my modifications are removed from AndroidManifest.xml.


### Steps to reproduce

Followed this tutorial
https://docs.godotengine.org/en/stable/tutorials/export/android_custom_build.html#doc-android-custom-build.

then open android project in Android studio and edit AndroidManifest.xml.

### Minimal reproduction project

N/A

print_verbose("Storing project name for locale " + locale + " under " + locale_directory);
			store_string_at_path(locale_directory, processed_xml_string);
		} else {
			
			store_string_at_path(locale_directory, processed_default_xml_string);
		}
	}
	da->list_dir_end();
	return OK;
}
String bool_to_string(bool v) {
	return v ? "true" : "false";
}
String _get_gles_tag() {
	return "    <uses-feature android:glEsVersion=\"0x00030000\" android:required=\"true\" />\n";
}
String _get_screen_sizes_tag(const Ref<EditorExportPreset> &p_preset) {
	String manifest_screen_sizes = "    <supports-screens \n        tools:node=\"replace\"";
	String sizes[] = { "small", "normal", "large", "xlarge" };
	size_t num_sizes = sizeof(sizes) / sizeof(sizes[0]);
	for (size_t i = 0; i < num_sizes; i++) {
		String feature_name = vformat("screen/support_%s", sizes[i]);
		String feature_support = bool_to_string(p_preset->get(feature_name));
		String xml_entry = vformat("\n        android:%sScreens=\"%s\"", sizes[i], feature_support);
		manifest_screen_sizes += xml_entry;
	}
	manifest_screen_sizes += " />\n";
	return manifest_screen_sizes;
}
String _get_xr_features_tag(const Ref<EditorExportPreset> &p_preset, bool p_uses_vulkan) {