### Godot version

Godot 4.1-beta2

### System information

Manjaro Gnome, Intel Core i7-11800H

### Issue description

On a relatively modern laptop (Intel Core i7-11800H), in a scene with many scripted nodes (total of 900+ with roughly half of them scripted), adding or duplicating a node freezes the editor for several seconds. Godot 4.0.2 handles such scenes much better!

Here is a flame graph captured while repeatedly duplicating simple Marker2D nodes with Ctrl+D in a complicated scene:
![Screenshot from 2023-06-15 23-54-38](https://github.com/godotengine/godot/assets/2766569/d0019f17-9b82-4a26-9b47-71fa7a3bef3a)

Performance data file to use with hotspot v1.4.1 (relevant data starts at the 75-second mark and lasts about 20+ seconds):
[perf.data.perfparser.zip](https://github.com/godotengine/godot/files/11763700/perf.data.perfparser.zip)



### Steps to reproduce

1) Add 1000 nodes with a script attached.
2) Duplicate a node and witness lags.

Also affects scrolling the scene tree dock.

### Minimal reproduction project

[add_node_lags_repro.zip](https://github.com/godotengine/godot/files/11763731/add_node_lags_repro.zip)

for (int i = 0; i < hsplits.size(); i++) {
		p_layout->set_value(p_section, "dock_hsplit_" + itos(i + 1), hsplits[i]->get_split_offset());
	}
	
	p_layout->set_value(p_section, "dock_filesystem_split", FileSystemDock::get_singleton()->get_split_offset());
	p_layout->set_value(p_section, "dock_filesystem_display_mode", FileSystemDock::get_singleton()->get_display_mode());
	p_layout->set_value(p_section, "dock_filesystem_file_sort", FileSystemDock::get_singleton()->get_file_sort());
	p_layout->set_value(p_section, "dock_filesystem_file_list_display_mode", FileSystemDock::get_singleton()->get_file_list_display_mode());
	PackedStringArray selected_files = FileSystemDock::get_singleton()->get_selected_paths();
	p_layout->set_value(p_section, "dock_filesystem_selected_paths", selected_files);
	Vector<String> uncollapsed_paths = FileSystemDock::get_singleton()->get_uncollapsed_paths();
	p_layout->set_value(p_section, "dock_filesystem_uncollapsed_paths", uncollapsed_paths);
}
void EditorNode::_save_open_scenes_to_config(Ref<ConfigFile> p_layout) {
	PackedStringArray scenes;
	for (int i = 0; i < editor_data.get_edited_scene_count(); i++) {
		String path = editor_data.get_scene_path(i);
		if (path.is_empty()) {
			continue;
		}
		scenes.push_back(path);
	}
	p_layout->set_value(EDITOR_NODE_CONFIG_SECTION, "open_scenes", scenes);
	String currently_edited_scene_path = editor_data.get_scene_path(editor_data.get_edited_scene());
	
	if (!currently_edited_scene_path.is_empty()) {
		p_layout->set_value(EDITOR_NODE_CONFIG_SECTION, "current_scene", currently_edited_scene_path);
	}
}
void EditorNode::save_editor_layout_delayed() {