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***Bugsquad note:** This issue has been confirmed several times already. No need to confirm it further.*

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### Godot version

v4.0.2.stable.official [7a0977ce2]

### System information

Ubuntu 22.04

### Issue description

I followed this tutorial
https://docs.godotengine.org/en/stable/tutorials/export/android_custom_build.html#doc-android-custom-build.

I want to create Android launcher app to do this i added following code to AndroidManifest.xml in Android Studio.
`<category android:name="android.intent.category.HOME" />
<category android:name="android.intent.category.DEFAULT" />`

But when I export APK my modifications are removed from AndroidManifest.xml.


### Steps to reproduce

Followed this tutorial
https://docs.godotengine.org/en/stable/tutorials/export/android_custom_build.html#doc-android-custom-build.

then open android project in Android studio and edit AndroidManifest.xml.

### Minimal reproduction project

N/A

_process_launcher_icons(file, main_image, launcher_icons[i].dimensions, data);
					}
				}
				if (foreground.is_valid() && !foreground->is_empty()) {
					if (file == launcher_adaptive_icon_foregrounds[i].export_path) {
						_process_launcher_icons(file, foreground, launcher_adaptive_icon_foregrounds[i].dimensions, data);
					}
				}
				if (background.is_valid() && !background->is_empty()) {
					if (file == launcher_adaptive_icon_backgrounds[i].export_path) {
						_process_launcher_icons(file, background, launcher_adaptive_icon_backgrounds[i].dimensions, data);
					}
				}
			}
		}
		if (file.ends_with(".so")) {
			bool enabled = false;
			for (int i = 0; i < enabled_abis.size(); ++i) {
				if (file.begins_with("lib/" + enabled_abis[i].abi + "/")) {
					invalid_abis.erase(enabled_abis[i]);
					enabled = true;
					break;
				}
			}
			if (!enabled) {
				skip = true;
			}
		}
		if (file.begins_with("META-INF") && should_sign) {
			skip = true;