### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
tab_preview_panel->hide();
	if (p_tab == editor_data.get_edited_scene()) {
		return; 
	}
	set_current_scene(p_tab);
}
Button *EditorNode::add_bottom_panel_item(String p_text, Control *p_item) {
	Button *tb = memnew(Button);
	tb->set_flat(true);
	tb->connect("toggled", callable_mp(this, &EditorNode::_bottom_panel_switch).bind(bottom_panel_items.size()));
	tb->set_text(p_text);
	tb->set_toggle_mode(true);
	tb->set_focus_mode(Control::FOCUS_NONE);
	bottom_panel_vb->add_child(p_item);
	bottom_panel_hb->move_to_front();
	bottom_panel_hb_editors->add_child(tb);
	p_item->set_v_size_flags(Control::SIZE_EXPAND_FILL);
	p_item->hide();
	BottomPanelItem bpi;
	bpi.button = tb;
	bpi.control = p_item;
	bpi.name = p_text;
	bottom_panel_items.push_back(bpi);
	return tb;
}
void EditorNode::hide_bottom_panel() {