### Godot version

4.0.2

### System information

Linux Mint 21

### Issue description

On the minimal reproduction project, with a 3 level hierarchy and 2 autoloads, when running the game we get a parse error in daughter.gd where we use a parent member.

**Additional remarks :** 
- We have a circular dependency involving one of the autoloads : Autoload2 references Daughter which references Mother which references GrandMother which references Autoload2
- Autoload1 references Mother which references GrandMother which references Autoload2
- We don't have any error if we switch the 2 autoloads order in Project Settings
- We get the same error if _member is put in GrandMother class instead of Mother class
- We still get the issue if we disable Autoload1 in Project Settings

**A quick look in Godot source code :**
- GDScriptCache::full_gdscript_cache contains invalid scripts (ie script->is_valid() is false)
- I think the engine tries to compile GrandMother, then Daughter (but it fails), then Mother

(This issue might be related to https://github.com/godotengine/godot/issues/75388.)

### Steps to reproduce

To get the parse error :
- Open the minimal reproduction project
- Run the game
You'll get `Parser Error: Identifier not found: _member`.

### Minimal reproduction project

[ParseError_Project.zip](https://github.com/godotengine/godot/files/11725756/ParseError_Project.zip)

StringName class_name;
									if (base.type.kind == GDScriptDataType::NATIVE) {
										class_name = base.type.native_type;
									} else {
										class_name = base.type.native_type == StringName() ? base.type.script_type->get_instance_base_type() : base.type.native_type;
									}
									if (ClassDB::class_exists(class_name) && ClassDB::has_method(class_name, call->function_name)) {
										MethodBind *method = ClassDB::get_method(class_name, call->function_name);
										if (_can_use_ptrcall(method, arguments)) {
											
											gen->write_call_ptrcall(result, base, method, arguments);
										} else {
											
											gen->write_call_method_bind(result, base, method, arguments);
										}
									} else {
										gen->write_call(result, base, call->function_name, arguments);
									}
								} else if (base.type.has_type && base.type.kind == GDScriptDataType::BUILTIN) {
									gen->write_call_builtin_type(result, base, base.type.builtin_type, call->function_name, arguments);
								} else {
									gen->write_call(result, base, call->function_name, arguments);
								}
								if (base.mode == GDScriptCodeGenerator::Address::TEMPORARY) {
									gen->pop_temporary();
								}
							}
						} else {
							_set_error("Cannot call something that isn't a function.", call->callee);