### Godot version

4.1.beta (7b1387ff2)

### System information

Mageia 9, Linux

### Issue description

When opening an empty project in latest `master`, I get these errors:
```
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: get_scene_path (editor/scu/../editor_data.cpp:880)
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: check_and_update_scene (editor/scu/../editor_data.cpp:683)
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: set_edited_scene (editor/scu/../editor_data.cpp:745)
```

Possibly related to recent changes to restore past sessions, but there's nothing to restore in this case?

### Steps to reproduce

- Create a new project, edit it
- Quit to project manager
- Re-open the newly created project -> errors

### Minimal reproduction project

Empty project.
ofs.x += s.x * 4;
				ofs.x += s.x;
			} break;
			case DOCK_SLOT_RIGHT_BR: {
				ofs.x += s.x * 4;
				ofs += s;
			} break;
		}
		Rect2 r(ofs, s);
		dock_select_rect[i] = r;
		r.position += Vector2(2, 5);
		r.size -= Vector2(4, 7);
		if (i == dock_select_rect_over_idx) {
			dock_select->draw_rect(r, used_selected);
		} else if (dock_slot[i]->get_tab_count() == 0) {
			dock_select->draw_rect(r, unused);
		} else {
			dock_select->draw_rect(r, used);
		}
		for (int j = 0; j < MIN(3, dock_slot[i]->get_tab_count()); j++) {
			int xofs = (r.size.width / 3) * j;
			Color c = used;
			if (i == dock_popup_selected_idx && (dock_slot[i]->get_current_tab() > 3 || dock_slot[i]->get_current_tab() == j)) {
				c = tab_selected;
			}
			dock_select->draw_rect(Rect2(2 + ofs.x + xofs, ofs.y, r.size.width / 3 - 1, 3), c);
		}
	}
}
void EditorNode::_save_editor_layout() {