### Godot version

v4.1.stable.official [970459615]

### System information

MacOS Big Sure 11.3

### Issue description

I got a bug report on my project and then did a deeper analysis to find the rootcause of Godot crashing on exit.
https://github.com/MikeSchulze/gdUnit4/issues/225

short story
- i removed all classes and resources step by step but still crashs at Godot exit
- finally i find out a simple print statement in the `func _exit_tree():` let the editor crash at exit.


### Steps to reproduce

Step one
- Create a new Project
- Create a new plugin over the editor provided plugin creation tool
- activate and exit ... works

Step two
- open the `plugin.gd` and add a print statement to `func _exit_tree():`

```
@tool
extends EditorPlugin


func _enter_tree():
	# Initialization of the plugin goes here.
	pass


func _exit_tree():
	prints("_exit_tree")
	# Clean-up of the plugin goes here.
	pass

```

- close/restart the editor is crashing at exit


### Minimal reproduction project

n/a
pick_main_scene->set_meta("from_native", p_from_native); 
	String main_scene = GLOBAL_GET("application/run/main_scene");
	if (main_scene.is_empty()) {
		current_menu_option = -1;
		pick_main_scene->set_text(TTR("No main scene has ever been defined, select one?\nYou can change it later in \"Project Settings\" under the 'application' category."));
		pick_main_scene->popup_centered();
		if (editor_data.get_edited_scene_root()) {
			select_current_scene_button->set_disabled(false);
			select_current_scene_button->grab_focus();
		} else {
			select_current_scene_button->set_disabled(true);
		}
		return false;
	}
	if (!FileAccess::exists(main_scene)) {
		current_menu_option = -1;
		pick_main_scene->set_text(vformat(TTR("Selected scene '%s' does not exist, select a valid one?\nYou can change it later in \"Project Settings\" under the 'application' category."), main_scene));
		pick_main_scene->popup_centered();
		return false;
	}
	if (ResourceLoader::get_resource_type(main_scene) != "PackedScene") {
		current_menu_option = -1;
		pick_main_scene->set_text(vformat(TTR("Selected scene '%s' is not a scene file, select a valid one?\nYou can change it later in \"Project Settings\" under the 'application' category."), main_scene));
		pick_main_scene->popup_centered();
		return false;
	}
	return true;
}
void EditorNode::_immediate_dialog_confirmed() {