### Godot version

3.5.2.stable, 4.0.1.stable

### System information

Arch Linux

### Issue description

When the `Show Hidden Files` property is enabled in the Editor Settings:
![image](https://user-images.githubusercontent.com/6501975/226908540-8e70e520-3dcd-46e4-beaf-103ac176c1de.png)
Any `FileDialog` nodes from the project will inherit this setting, and their `Show Hidden Files` property is set to true everytime the scene is re-opened:

https://user-images.githubusercontent.com/6501975/226909135-a8fafdf7-ca36-40aa-b69a-a7baf2d7ae4f.mp4


This occurs on 3.5.2 as well.

### Steps to reproduce

- Enable `Show Hidden Files` property in the Editor Settings:
    - Reload Godot for the bug to occur
- Create a FileDialog node, and set it's `Show Hidden Files` property to false
- Save and close the scene, and reopen it
- The `Show Hidden Files` property is reset to true.

### Minimal reproduction project

N/A
String action = undo_redo->get_current_action_name();
					if (action.is_empty()) {
						break;
					}
					switch (undo_redo->get_current_action_history_id()) {
						case EditorUndoRedoManager::GLOBAL_HISTORY:
							log->add_message(vformat(TTR("Global Redo: %s"), action), EditorLog::MSG_TYPE_EDITOR);
							break;
						case EditorUndoRedoManager::REMOTE_HISTORY:
							log->add_message(vformat(TTR("Remote Redo: %s"), action), EditorLog::MSG_TYPE_EDITOR);
							break;
						default:
							log->add_message(vformat(TTR("Scene Redo: %s"), action), EditorLog::MSG_TYPE_EDITOR);
					}
				}
			}
		} break;
		case EDIT_RELOAD_SAVED_SCENE: {
			Node *scene = get_edited_scene();
			if (!scene) {
				break;
			}
			String filename = scene->get_scene_file_path();
			if (filename.is_empty()) {
				show_warning(TTR("Can't reload a scene that was never saved."));
				break;
			}
			if (unsaved_cache && !p_confirmed) {
				confirmation->set_ok_button_text(TTR("Reload Saved Scene"));
				confirmation->set_text(