### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
if (!distribution_version.is_empty()) {
		info.push_back(distribution_name + " " + distribution_version);
	} else {
		info.push_back(distribution_name);
	}
#ifdef LINUXBSD_ENABLED
	if (!display_server.is_empty()) {
		info.push_back(display_server);
	}
#endif 
	info.push_back(vformat("%s (%s)", driver_name, rendering_method));
	String graphics;
	if (!device_type_string.is_empty()) {
		graphics = device_type_string + " ";
	}
	graphics += rendering_device_name;
	if (video_adapter_driver_info.size() == 2) { 
		String vad_name = video_adapter_driver_info[0];
		String vad_version = video_adapter_driver_info[1]; 
		if (!vad_version.is_empty()) {
			graphics += vformat(" (%s; %s)", vad_name, vad_version);
		} else {
			graphics += vformat(" (%s)", vad_name);
		}
	}
	info.push_back(graphics);
	info.push_back(vformat("%s (%d Threads)", processor_name, processor_count));
	return String(" - ").join(info);
}
Ref<Texture2D> EditorNode::_file_dialog_get_icon(const String &p_path) {