### Godot version

4.1 beta 3

The same project works fine on 4.1 **beta 1 and beta 2.**

### System information

Tested on MacOS, Fedora and HTML5

### Issue description

I have a problem in version 4.1 beta 3 with a popup (popup panel). The first time it always displays correctly. Every subsequent time, I only see a black spot. 

[Nagranie ekranu z 2023-06-23 11-35-28.webm](https://github.com/godotengine/godot/assets/5132385/f7a7ad08-754c-4b4b-b594-b6880eff5f3d)

*The same if I show popup by methods like popup_centered.


### Steps to reproduce

I'm trying to reproduce it with a clean and minimal example, but unfortunately, without success. Maybe someone else has this issue or knows a way to reproduce it?

### Minimal reproduction project

I'm trying to create it.
texture_set_data(p_texture, p_image, p_layer);
	Texture *tex = texture_owner.get_or_null(p_texture);
	ERR_FAIL_COND(!tex);
	GLES3::Utilities::get_singleton()->texture_resize_data(tex->tex_id, tex->total_data_size);
#ifdef TOOLS_ENABLED
	tex->image_cache_2d.unref();
#endif
}
void TextureStorage::texture_proxy_update(RID p_texture, RID p_proxy_to) {