### Godot version

Godot 4.1-beta2

### System information

Manjaro Gnome, Intel Core i7-11800H

### Issue description

On a relatively modern laptop (Intel Core i7-11800H), in a scene with many scripted nodes (total of 900+ with roughly half of them scripted), adding or duplicating a node freezes the editor for several seconds. Godot 4.0.2 handles such scenes much better!

Here is a flame graph captured while repeatedly duplicating simple Marker2D nodes with Ctrl+D in a complicated scene:
![Screenshot from 2023-06-15 23-54-38](https://github.com/godotengine/godot/assets/2766569/d0019f17-9b82-4a26-9b47-71fa7a3bef3a)

Performance data file to use with hotspot v1.4.1 (relevant data starts at the 75-second mark and lasts about 20+ seconds):
[perf.data.perfparser.zip](https://github.com/godotengine/godot/files/11763700/perf.data.perfparser.zip)



### Steps to reproduce

1) Add 1000 nodes with a script attached.
2) Duplicate a node and witness lags.

Also affects scrolling the scene tree dock.

### Minimal reproduction project

[add_node_lags_repro.zip](https://github.com/godotengine/godot/files/11763731/add_node_lags_repro.zip)

current_menu_option = -1;
	if (accept) {
		accept->set_ok_button_text(p_title);
		accept->set_text(p_text);
		EditorInterface::get_singleton()->popup_dialog_centered(accept);
	}
}
void EditorNode::show_save_accept(const String &p_text, const String &p_title) {
	current_menu_option = -1;
	if (save_accept) {
		save_accept->set_ok_button_text(p_title);
		save_accept->set_text(p_text);
		EditorInterface::get_singleton()->popup_dialog_centered(save_accept);
	}
}
void EditorNode::show_warning(const String &p_text, const String &p_title) {
	if (warning) {
		warning->set_text(p_text);
		warning->set_title(p_title);
		EditorInterface::get_singleton()->popup_dialog_centered(warning);
	} else {
		WARN_PRINT(p_title + " " + p_text);
	}
}
void EditorNode::_copy_warning(const String &p_str) {