### Godot version

Godot 4.1-beta2

### System information

Manjaro Gnome, Intel Core i7-11800H

### Issue description

On a relatively modern laptop (Intel Core i7-11800H), in a scene with many scripted nodes (total of 900+ with roughly half of them scripted), adding or duplicating a node freezes the editor for several seconds. Godot 4.0.2 handles such scenes much better!

Here is a flame graph captured while repeatedly duplicating simple Marker2D nodes with Ctrl+D in a complicated scene:
![Screenshot from 2023-06-15 23-54-38](https://github.com/godotengine/godot/assets/2766569/d0019f17-9b82-4a26-9b47-71fa7a3bef3a)

Performance data file to use with hotspot v1.4.1 (relevant data starts at the 75-second mark and lasts about 20+ seconds):
[perf.data.perfparser.zip](https://github.com/godotengine/godot/files/11763700/perf.data.perfparser.zip)



### Steps to reproduce

1) Add 1000 nodes with a script attached.
2) Duplicate a node and witness lags.

Also affects scrolling the scene tree dock.

### Minimal reproduction project

[add_node_lags_repro.zip](https://github.com/godotengine/godot/files/11763731/add_node_lags_repro.zip)

if (err != OK) {
		show_accept(TTR("Couldn't save scene. Likely dependencies (instances or inheritance) couldn't be satisfied."), TTR("OK"));
		return;
	}
	int flg = 0;
	if (EDITOR_GET("filesystem/on_save/compress_binary_resources")) {
		flg |= ResourceSaver::FLAG_COMPRESS;
	}
	flg |= ResourceSaver::FLAG_REPLACE_SUBRESOURCE_PATHS;
	err = ResourceSaver::save(sdata, p_file, flg);
	
	emit_signal(SNAME("scene_saved"), p_file);
	_save_external_resources();
	editor_data.save_editor_external_data();
	for (Ref<AnimatedValuesBackup> &E : anim_backups) {
		E->restore();
	}
	if (err == OK) {
		scene->set_scene_file_path(ProjectSettings::get_singleton()->localize_path(p_file));
		editor_data.set_scene_as_saved(idx);
		editor_data.set_scene_modified_time(idx, FileAccess::get_modified_time(p_file));
		editor_folding.save_scene_folding(scene, p_file);
		_update_title();
		_update_scene_tabs();
	} else {
		_dialog_display_save_error(p_file, err);
	}
	scene->propagate_notification(NOTIFICATION_EDITOR_POST_SAVE);
}
void EditorNode::save_all_scenes() {