### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
if (InspectorDock::get_inspector_singleton()) {
		InspectorDock::get_inspector_singleton()->update_tree();
	}
}
void EditorNode::_editor_select_next() {
	int editor = _get_current_main_editor();
	do {
		if (editor == editor_table.size() - 1) {
			editor = 0;
		} else {
			editor++;
		}
	} while (!main_editor_buttons[editor]->is_visible());
	editor_select(editor);
}
void EditorNode::_open_command_palette() {
	command_palette->open_popup();
}
void EditorNode::_editor_select_prev() {
	int editor = _get_current_main_editor();
	do {
		if (editor == 0) {
			editor = editor_table.size() - 1;
		} else {
			editor--;
		}
	} while (!main_editor_buttons[editor]->is_visible());
	editor_select(editor);
}
Error EditorNode::load_resource(const String &p_resource, bool p_ignore_broken_deps) {