### Godot version

4.0.2

### System information

Windows 10 x64

### Issue description

![image](https://user-images.githubusercontent.com/2223172/231459722-294d88f9-dae3-4a3f-8e7f-e5340ca0dd25.png)
Both paths point to the same node, but the second one appears as if the node wasn't found. I assume this is because the NodePaths in array don't have the scene's node as "parent", so the path can't be resolved properly.

### Steps to reproduce

1.
```GDScript
@export var np1: NodePath
@export var np2: Array[NodePath]
```
2. Assign the same node
3. Compare the results

### Minimal reproduction project

N/A
return state->can_instantiate();
}
Node *PackedScene::instantiate(GenEditState p_edit_state) const {
#ifndef TOOLS_ENABLED
	ERR_FAIL_COND_V_MSG(p_edit_state != GEN_EDIT_STATE_DISABLED, nullptr, "Edit state is only for editors, does not work without tools compiled.");
#endif
	Node *s = state->instantiate((SceneState::GenEditState)p_edit_state);
	if (!s) {
		return nullptr;
	}
	if (p_edit_state != GEN_EDIT_STATE_DISABLED) {
		s->set_scene_instance_state(state);
	}
	if (!is_built_in()) {
		s->set_scene_file_path(get_path());
	}
	s->notification(Node::NOTIFICATION_SCENE_INSTANTIATED);
	return s;
}
void PackedScene::replace_state(Ref<SceneState> p_by) {