### Godot version

3.5.2.stable, 4.0.1.stable

### System information

Arch Linux

### Issue description

When the `Show Hidden Files` property is enabled in the Editor Settings:
![image](https://user-images.githubusercontent.com/6501975/226908540-8e70e520-3dcd-46e4-beaf-103ac176c1de.png)
Any `FileDialog` nodes from the project will inherit this setting, and their `Show Hidden Files` property is set to true everytime the scene is re-opened:

https://user-images.githubusercontent.com/6501975/226909135-a8fafdf7-ca36-40aa-b69a-a7baf2d7ae4f.mp4


This occurs on 3.5.2 as well.

### Steps to reproduce

- Enable `Show Hidden Files` property in the Editor Settings:
    - Reload Godot for the bug to occur
- Create a FileDialog node, and set it's `Show Hidden Files` property to false
- Save and close the scene, and reopen it
- The `Show Hidden Files` property is reset to true.

### Minimal reproduction project

N/A
path = path.substr(6);
				}
				path = path.get_basename();
				
				scene_name = scene_name.trim_suffix("/");
				path = path.trim_suffix("/");
				
				
				
				can_proceed = can_proceed || (path.size() - scene_name.size()) >= 1;
				E = E->next();
				if (to_erase) {
					iset.erase(to_erase);
				}
			}
			if (!can_proceed) {
				break;
			}
		}
	}
}
void EditorNode::_update_scene_tabs() {
	bool show_rb = EDITOR_GET("interface/scene_tabs/show_script_button");
	if (DisplayServer::get_singleton()->has_feature(DisplayServer::FEATURE_GLOBAL_MENU)) {
		DisplayServer::get_singleton()->global_menu_clear("_dock");
	}
	
	Vector<String> disambiguated_scene_names;
	Vector<String> full_path_names;
	for (int i = 0; i < editor_data.get_edited_scene_count(); i++) {