### Godot version

Godot 4.1-beta2

### System information

Manjaro Gnome, Intel Core i7-11800H

### Issue description

On a relatively modern laptop (Intel Core i7-11800H), in a scene with many scripted nodes (total of 900+ with roughly half of them scripted), adding or duplicating a node freezes the editor for several seconds. Godot 4.0.2 handles such scenes much better!

Here is a flame graph captured while repeatedly duplicating simple Marker2D nodes with Ctrl+D in a complicated scene:
![Screenshot from 2023-06-15 23-54-38](https://github.com/godotengine/godot/assets/2766569/d0019f17-9b82-4a26-9b47-71fa7a3bef3a)

Performance data file to use with hotspot v1.4.1 (relevant data starts at the 75-second mark and lasts about 20+ seconds):
[perf.data.perfparser.zip](https://github.com/godotengine/godot/files/11763700/perf.data.perfparser.zip)



### Steps to reproduce

1) Add 1000 nodes with a script attached.
2) Duplicate a node and witness lags.

Also affects scrolling the scene tree dock.

### Minimal reproduction project

[add_node_lags_repro.zip](https://github.com/godotengine/godot/files/11763731/add_node_lags_repro.zip)

accept->queue_free();
			}
			if (save_accept) {
				save_accept->queue_free();
			}
			editor_data.save_editor_external_data();
			FileAccess::set_file_close_fail_notify_callback(nullptr);
			log->deinit(); 
			editor_data.clear_edited_scenes();
		} break;
		case NOTIFICATION_READY: {
			{
				_initializing_plugins = true;
				Vector<String> addons;
				if (ProjectSettings::get_singleton()->has_setting("editor_plugins/enabled")) {
					addons = GLOBAL_GET("editor_plugins/enabled");
				}
				for (int i = 0; i < addons.size(); i++) {
					set_addon_plugin_enabled(addons[i], true);
				}
				_initializing_plugins = false;
				if (!pending_addons.is_empty()) {
					EditorFileSystem::get_singleton()->connect("script_classes_updated", callable_mp(this, &EditorNode::_enable_pending_addons));
				}
			}
			RenderingServer::get_singleton()->viewport_set_disable_2d(get_scene_root()->get_viewport_rid(), true);
			RenderingServer::get_singleton()->viewport_set_environment_mode(get_viewport()->get_viewport_rid(), RenderingServer::VIEWPORT_ENVIRONMENT_DISABLED);
			feature_profile_manager->notify_changed();
			_select_default_main_screen_plugin();