### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
ERR_FAIL_COND_V_MSG(p_class.is_empty(), nullptr, "Class name cannot be empty.");
	EditorData &ed = EditorNode::get_editor_data();
	
	if (p_script.is_valid()) {
		Ref<Texture2D> script_icon = ed.get_script_icon(p_script);
		if (script_icon.is_valid()) {
			return script_icon;
		}
	}
	
	
	
	Ref<Texture2D> ext_icon = ed.extension_class_get_icon(p_class);
	if (ext_icon.is_valid()) {
		return ext_icon;
	}
	
	
	const EditorData::CustomType *ctype = ed.get_custom_type_by_name(p_class);
	if (ctype && ctype->icon.is_valid()) {
		return ctype->icon;