### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
return;
		}
		Ref<InputEventMouseButton> mb = me;
		if (mb.is_valid() && mb->get_button_index() == MouseButton::LEFT && mb->is_pressed() && dock_popup_selected_idx != nrect) {
			Control *dock = dock_slot[dock_popup_selected_idx]->get_current_tab_control();
			if (dock) {
				dock_slot[dock_popup_selected_idx]->remove_child(dock);
			}
			if (dock_slot[dock_popup_selected_idx]->get_tab_count() == 0) {
				dock_slot[dock_popup_selected_idx]->hide();
			} else {
				dock_slot[dock_popup_selected_idx]->set_current_tab(0);
			}
			dock_slot[nrect]->add_child(dock);
			dock_popup_selected_idx = nrect;
			dock_slot[nrect]->set_current_tab(dock_slot[nrect]->get_tab_count() - 1);
			dock_slot[nrect]->set_tab_title(dock_slot[nrect]->get_tab_count() - 1, TTRGET(dock->get_name()));
			dock_slot[nrect]->show();
			dock_select->queue_redraw();
			_update_dock_containers();
			_edit_current();
			_save_editor_layout();
		}
	}
}
void EditorNode::_dock_popup_exit() {
	dock_select_rect_over_idx = -1;
	dock_select->queue_redraw();
}
void EditorNode::_dock_pre_popup(int p_which) {