### Godot version

v4.2.dev.custom_build [60f3b7967]

### System information

Debian Linux X11 Xfce

### Issue description

Physics Picking within a `SubViewport` happens with `InputEventMouse` even when mouse events are disabled via `SubViewportContainer.mouse_filter = Control.MOUSE_FILTER_IGNORE`

The problem is that passive hovering still happens in the `SubViewport` with `SubViewportContainer.mouse_filter = Control.MOUSE_FILTER_IGNORE`.

I assume that it is a regression from #78017.

This was initially reported as a side-effect in #79271, which got closed, because the main issue was resolved.



### Steps to reproduce

1. Load and run MRP
2. move mouse over Icon

I would expect, that the `Area2D` receives no `InputEventMouse`, however it gets `_input_event` and also mouse-entered and mouse-exited signals.

### Minimal reproduction project

[IgnorePassiveHover.zip](https://github.com/godotengine/godot/files/12044510/IgnorePassiveHover.zip)

ERR_MAIN_THREAD_GUARD;
	ERR_FAIL_NULL(p_viewport);
	ERR_FAIL_NULL(p_control);
	if (gui.mouse_focus) {
		p_viewport->gui.mouse_focus = p_control;
		p_viewport->gui.mouse_focus_mask = gui.mouse_focus_mask;
		p_viewport->gui.key_focus = p_control;
		p_viewport->gui.forced_mouse_focus = true;
		gui.mouse_focus = nullptr;
		gui.forced_mouse_focus = false;
		gui.mouse_focus_mask.clear();
	}
}
void Viewport::set_sdf_oversize(SDFOversize p_sdf_oversize) {
	ERR_MAIN_THREAD_GUARD;
	ERR_FAIL_INDEX(p_sdf_oversize, SDF_OVERSIZE_MAX);
	sdf_oversize = p_sdf_oversize;
	RS::get_singleton()->viewport_set_sdf_oversize_and_scale(viewport, RS::ViewportSDFOversize(sdf_oversize), RS::ViewportSDFScale(sdf_scale));
}
Viewport::SDFOversize Viewport::get_sdf_oversize() const {
	ERR_READ_THREAD_GUARD_V(SDF_OVERSIZE_100_PERCENT);
	return sdf_oversize;
}
void Viewport::set_sdf_scale(SDFScale p_sdf_scale) {
	ERR_MAIN_THREAD_GUARD;
	ERR_FAIL_INDEX(p_sdf_scale, SDF_SCALE_MAX);
	sdf_scale = p_sdf_scale;
	RS::get_singleton()->viewport_set_sdf_oversize_and_scale(viewport, RS::ViewportSDFOversize(sdf_oversize), RS::ViewportSDFScale(sdf_scale));
}
Viewport::SDFScale Viewport::get_sdf_scale() const {