### Godot version

Godot 4.1-beta2

### System information

Manjaro Gnome, Intel Core i7-11800H

### Issue description

On a relatively modern laptop (Intel Core i7-11800H), in a scene with many scripted nodes (total of 900+ with roughly half of them scripted), adding or duplicating a node freezes the editor for several seconds. Godot 4.0.2 handles such scenes much better!

Here is a flame graph captured while repeatedly duplicating simple Marker2D nodes with Ctrl+D in a complicated scene:
![Screenshot from 2023-06-15 23-54-38](https://github.com/godotengine/godot/assets/2766569/d0019f17-9b82-4a26-9b47-71fa7a3bef3a)

Performance data file to use with hotspot v1.4.1 (relevant data starts at the 75-second mark and lasts about 20+ seconds):
[perf.data.perfparser.zip](https://github.com/godotengine/godot/files/11763700/perf.data.perfparser.zip)



### Steps to reproduce

1) Add 1000 nodes with a script attached.
2) Duplicate a node and witness lags.

Also affects scrolling the scene tree dock.

### Minimal reproduction project

[add_node_lags_repro.zip](https://github.com/godotengine/godot/files/11763731/add_node_lags_repro.zip)

main_menu->set_start_index(0); 
	main_menu->set_prefer_global_menu(global_menu);
	main_menu->set_switch_on_hover(true);
	file_menu = memnew(PopupMenu);
	file_menu->set_name(TTR("Scene"));
	main_menu->add_child(file_menu);
	main_menu->set_menu_tooltip(0, TTR("Operations with scene files."));
	prev_scene = memnew(Button);
	prev_scene->set_flat(true);
	prev_scene->set_icon(gui_base->get_theme_icon(SNAME("PrevScene"), SNAME("EditorIcons")));
	prev_scene->set_tooltip_text(TTR("Go to previously opened scene."));
	prev_scene->set_disabled(true);
	prev_scene->connect("pressed", callable_mp(this, &EditorNode::_menu_option).bind(FILE_OPEN_PREV));
	gui_base->add_child(prev_scene);
	prev_scene->set_position(Point2(3, 24));
	prev_scene->hide();
	accept = memnew(AcceptDialog);
	accept->set_unparent_when_invisible(true);
	save_accept = memnew(AcceptDialog);
	save_accept->set_unparent_when_invisible(true);
	save_accept->connect("confirmed", callable_mp(this, &EditorNode::_menu_option).bind((int)MenuOptions::FILE_SAVE_AS_SCENE));
	project_export = memnew(ProjectExportDialog);
	gui_base->add_child(project_export);
	dependency_error = memnew(DependencyErrorDialog);
	gui_base->add_child(dependency_error);
	dependency_fixer = memnew(DependencyEditor);
	gui_base->add_child(dependency_fixer);
	editor_settings_dialog = memnew(EditorSettingsDialog);
	gui_base->add_child(editor_settings_dialog);
	project_settings_editor = memnew(ProjectSettingsEditor(&editor_data));