### Godot version

4.1.beta (7b1387ff2)

### System information

Mageia 9, Linux

### Issue description

When opening an empty project in latest `master`, I get these errors:
```
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: get_scene_path (editor/scu/../editor_data.cpp:880)
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: check_and_update_scene (editor/scu/../editor_data.cpp:683)
ERROR: Index p_idx = -1 is out of bounds (edited_scene.size() = 1).
   at: set_edited_scene (editor/scu/../editor_data.cpp:745)
```

Possibly related to recent changes to restore past sessions, but there's nothing to restore in this case?

### Steps to reproduce

- Create a new project, edit it
- Quit to project manager
- Re-open the newly created project -> errors

### Minimal reproduction project

Empty project.
if (p_custom_action_name == "select_current") {
		Node *scene = editor_data.get_edited_scene_root();
		if (!scene) {
			show_accept(TTR("There is no defined scene to run."), TTR("OK"));
			return;
		}
		pick_main_scene->hide();
		if (!FileAccess::exists(scene->get_scene_file_path())) {
			current_menu_option = FILE_SAVE_AND_RUN_MAIN_SCENE;
			_menu_option_confirm(FILE_SAVE_AS_SCENE, true);
			file->set_title(TTR("Save scene before running..."));
		} else {
			current_menu_option = SETTINGS_PICK_MAIN_SCENE;
			_dialog_action(scene->get_scene_file_path());
		}
	}
}
Ref<Texture2D> EditorNode::_get_class_or_script_icon(const String &p_class, const Ref<Script> &p_script, const String &p_fallback) {