### Godot version

3.5.2.stable, 4.0.1.stable

### System information

Arch Linux

### Issue description

When the `Show Hidden Files` property is enabled in the Editor Settings:
![image](https://user-images.githubusercontent.com/6501975/226908540-8e70e520-3dcd-46e4-beaf-103ac176c1de.png)
Any `FileDialog` nodes from the project will inherit this setting, and their `Show Hidden Files` property is set to true everytime the scene is re-opened:

https://user-images.githubusercontent.com/6501975/226909135-a8fafdf7-ca36-40aa-b69a-a7baf2d7ae4f.mp4


This occurs on 3.5.2 as well.

### Steps to reproduce

- Enable `Show Hidden Files` property in the Editor Settings:
    - Reload Godot for the bug to occur
- Create a FileDialog node, and set it's `Show Hidden Files` property to false
- Save and close the scene, and reopen it
- The `Show Hidden Files` property is reset to true.

### Minimal reproduction project

N/A
_update_title();
	_update_scene_tabs();
	_add_to_recent_scenes(lpath);
	if (editor_folding.has_folding_data(lpath)) {
		editor_folding.load_scene_folding(new_scene, lpath);
	} else if (EDITOR_GET("interface/inspector/auto_unfold_foreign_scenes")) {
		editor_folding.unfold_scene(new_scene);
		editor_folding.save_scene_folding(new_scene, lpath);
	}
	prev_scene->set_disabled(previous_scenes.size() == 0);
	opening_prev = false;
	SceneTreeDock::get_singleton()->set_selected(new_scene);
	EditorDebuggerNode::get_singleton()->update_live_edit_root();
	push_item(new_scene);
	
	if (editor_state_cf->has_section_key("editor_states", "selected_nodes")) {
		TypedArray<NodePath> selected_node_list = editor_state_cf->get_value("editor_states", "selected_nodes", TypedArray<String>());
		for (int i = 0; i < selected_node_list.size(); i++) {
			Node *selected_node = new_scene->get_node_or_null(selected_node_list[i]);
			if (selected_node) {
				editor_selection->add_node(selected_node);
			}
		}
	}
	if (!restoring_scenes) {
		save_editor_layout_delayed();
	}
	return OK;
}
HashMap<StringName, Variant> EditorNode::get_modified_properties_for_node(Node *p_node) {