### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
editor_export = memnew(EditorExport);
	add_child(editor_export);
	
	EditorColorMap::create();
	theme = create_custom_theme();
	DisplayServer::set_early_window_clear_color_override(true, theme->get_color(SNAME("background"), SNAME("Editor")));
	register_exporters();
	EDITOR_DEF("interface/editor/save_on_focus_loss", false);
	EDITOR_DEF("interface/editor/show_update_spinner", false);
	EDITOR_DEF("interface/editor/update_continuously", false);
	EDITOR_DEF("interface/editor/localize_settings", true);
	EDITOR_DEF_RST("interface/scene_tabs/restore_scenes_on_load", true);
	EDITOR_DEF_RST("interface/inspector/default_property_name_style", EditorPropertyNameProcessor::STYLE_CAPITALIZED);
	EditorSettings::get_singleton()->add_property_hint(PropertyInfo(Variant::INT, "interface/inspector/default_property_name_style", PROPERTY_HINT_ENUM, "Raw,Capitalized,Localized"));
	EDITOR_DEF_RST("interface/inspector/default_float_step", 0.001);
	
	
	EditorSettings::get_singleton()->add_property_hint(PropertyInfo(Variant::FLOAT, "interface/inspector/default_float_step", PROPERTY_HINT_RANGE, "0.0000001,1,0.0000001"));
	EDITOR_DEF_RST("interface/inspector/disable_folding", false);
	EDITOR_DEF_RST("interface/inspector/auto_unfold_foreign_scenes", true);
	EDITOR_DEF("interface/inspector/horizontal_vector2_editing", false);
	EDITOR_DEF("interface/inspector/horizontal_vector_types_editing", true);
	EDITOR_DEF("interface/inspector/open_resources_in_current_inspector", true);
	PackedStringArray open_in_new_inspector_defaults;
	
	open_in_new_inspector_defaults.push_back("Script");
	
	open_in_new_inspector_defaults.push_back("MeshLibrary");
	EDITOR_DEF("interface/inspector/resources_to_open_in_new_inspector", open_in_new_inspector_defaults);
	EDITOR_DEF("interface/inspector/default_color_picker_mode", 0);