### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
}
		Node3D *node_3d = Object::cast_to<Node3D>(p_node);
		if (node_3d) {
			new_additive_node_entry.transform_3d = node_3d->get_relative_transform(node_3d->get_parent());
		}
		
		HashMap<Node *, Node *> ownership_table;
		for (int i = 0; i < p_node->get_child_count(); i++) {
			Node *child = p_node->get_child(i);
			update_ownership_table_for_addition_node_ancestors(child, ownership_table);
		}
		new_additive_node_entry.ownership_table = ownership_table;
		p_addition_list.push_back(new_additive_node_entry);
		return;
	}
	for (int i = 0; i < p_node->get_child_count(); i++) {
		Node *child = p_node->get_child(i);
		update_diff_data_for_node(p_edited_scene, p_root, child, p_modification_table, p_addition_list);
	}
}
void EditorNode::open_request(const String &p_path) {
	if (!opening_prev) {
		List<String>::Element *prev_scene_item = previous_scenes.find(p_path);
		if (prev_scene_item != nullptr) {
			prev_scene_item->erase();
		}
	}
	load_scene(p_path); 
}
void EditorNode::edit_foreign_resource(Ref<Resource> p_resource) {