### Godot version

v4.2.dev.custom_build [60f3b7967]

### System information

Debian Linux X11 Xfce

### Issue description

Physics Picking within a `SubViewport` happens with `InputEventMouse` even when mouse events are disabled via `SubViewportContainer.mouse_filter = Control.MOUSE_FILTER_IGNORE`

The problem is that passive hovering still happens in the `SubViewport` with `SubViewportContainer.mouse_filter = Control.MOUSE_FILTER_IGNORE`.

I assume that it is a regression from #78017.

This was initially reported as a side-effect in #79271, which got closed, because the main issue was resolved.



### Steps to reproduce

1. Load and run MRP
2. move mouse over Icon

I would expect, that the `Area2D` receives no `InputEventMouse`, however it gets `_input_event` and also mouse-entered and mouse-exited signals.

### Minimal reproduction project

[IgnorePassiveHover.zip](https://github.com/godotengine/godot/files/12044510/IgnorePassiveHover.zip)

ERR_READ_THREAD_GUARD_V(Ref<World2D>());
	if (world_2d.is_valid()) {
		return world_2d;
	} else if (parent) {
		return parent->find_world_2d();
	} else {
		return Ref<World2D>();
	}
}
void Viewport::_propagate_viewport_notification(Node *p_node, int p_what) {
	p_node->notification(p_what);
	for (int i = 0; i < p_node->get_child_count(); i++) {
		Node *c = p_node->get_child(i);
		if (Object::cast_to<Viewport>(c)) {
			continue;
		}
		_propagate_viewport_notification(c, p_what);
	}
}
Ref<World2D> Viewport::get_world_2d() const {
	ERR_READ_THREAD_GUARD_V(Ref<World2D>());
	return world_2d;
}
Camera2D *Viewport::get_camera_2d() const {