### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
tile_inspector_no_tile_selected_label->set_v_size_flags(SIZE_EXPAND | SIZE_SHRINK_CENTER);
	tile_inspector_no_tile_selected_label->set_horizontal_alignment(HORIZONTAL_ALIGNMENT_CENTER);
	tile_inspector_no_tile_selected_label->set_autowrap_mode(TextServer::AUTOWRAP_WORD_SMART);
	tile_inspector_no_tile_selected_label->set_text(TTR("No tiles selected.\nSelect one or more tiles from the palette to edit its properties."));
	middle_vbox_container->add_child(tile_inspector_no_tile_selected_label);
	
	tile_data_editors_scroll = memnew(ScrollContainer);
	tile_data_editors_scroll->set_horizontal_scroll_mode(ScrollContainer::SCROLL_MODE_DISABLED);
	tile_data_editors_scroll->set_v_size_flags(SIZE_EXPAND_FILL);
	middle_vbox_container->add_child(tile_data_editors_scroll);
	VBoxContainer *tile_data_editors_vbox = memnew(VBoxContainer);
	tile_data_editors_vbox->set_h_size_flags(SIZE_EXPAND_FILL);
	tile_data_editors_scroll->add_child(tile_data_editors_vbox);
	tile_data_editors_popup = memnew(Popup);
	tile_data_editors_label = memnew(Label);
	tile_data_editors_label->set_text(TTR("Paint Properties:"));
	tile_data_editors_label->set_theme_type_variation("HeaderSmall");
	tile_data_editors_vbox->add_child(tile_data_editors_label);
	tile_data_editor_dropdown_button = memnew(Button);
	tile_data_editor_dropdown_button->connect("draw", callable_mp(this, &TileSetAtlasSourceEditor::_tile_data_editor_dropdown_button_draw));
	tile_data_editor_dropdown_button->connect("pressed", callable_mp(this, &TileSetAtlasSourceEditor::_tile_data_editor_dropdown_button_pressed));
	tile_data_editors_vbox->add_child(tile_data_editor_dropdown_button);
	tile_data_editor_dropdown_button->add_child(tile_data_editors_popup);
	tile_data_editors_tree = memnew(Tree);
	tile_data_editors_tree->set_hide_root(true);
	tile_data_editors_tree->set_anchors_and_offsets_preset(Control::PRESET_FULL_RECT);
	tile_data_editors_tree->set_h_scroll_enabled(false);
	tile_data_editors_tree->set_v_scroll_enabled(false);
	tile_data_editors_tree->connect("item_selected", callable_mp(this, &TileSetAtlasSourceEditor::_tile_data_editors_tree_selected));
	tile_data_editors_popup->add_child(tile_data_editors_tree);