### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
for (FileDialog *E : file_dialogs) {
		E->invalidate();
	}
	for (EditorFileDialog *E : editor_file_dialogs) {
		E->invalidate();
	}
	_mark_unsaved_scenes();
	
	String export_error;
	Error err = OK;
	if (!export_defer.preset.is_empty() && !EditorFileSystem::get_singleton()->is_scanning()) {
		String preset_name = export_defer.preset;
		
		
		export_defer.preset = "";
		Ref<EditorExportPreset> export_preset;
		for (int i = 0; i < EditorExport::get_singleton()->get_export_preset_count(); ++i) {
			export_preset = EditorExport::get_singleton()->get_export_preset(i);
			if (export_preset->get_name() == preset_name) {
				break;
			}
			export_preset.unref();