### Godot version

4.0 9f68d06

### System information

Windows 10 x64

### Issue description

When changing any property of tile source, e.g. name:
![image](https://user-images.githubusercontent.com/2223172/219977766-9babbd6c-cd75-41a0-a167-fe6da039d05e.png)
This error appears in the output:
```
UndoRedo history mismatch: expected 0, got 2.
Set name
```
It means that there is an undo action that starts with a global object and continues with a scene one.

Only happens when the TileSet is built-in and it makes the changes to the tileset being registered as global, i.e. not related to its scene (which results in history inconsistency after closing the scene).

I did some debugging and the action comes from inspector, which edits TileSetAtlasSourceEditor and then TileSetAtlasSource. I don't know what exactly triggers it; the properties should be only set on TileSetAtlasSource.

### Steps to reproduce

1. Add scene
2. Add tilemap
3. Add tileset (don't save it to a file)
4. Edit tileset
5. Add atlas source (e.g. drop icon.svg)
6. Change atlas name
7. Observe output

### Minimal reproduction project

N/A
for (int i = 0; i < TileSet::CELL_NEIGHBOR_MAX; i++) {
				TileSet::CellNeighbor bit = TileSet::CellNeighbor(i);
				if (tile_set->is_valid_terrain_peering_bit(current_terrain_set, bit)) {
					ADD_UNDO(tile_data_proxy, "terrains_peering_bit/" + String(TileSet::CELL_NEIGHBOR_ENUM_TO_TEXT[i]));
				}
			}
		}
		internal_undo_redo->end_force_keep_in_merge_ends();
	}
	TileSetAtlasSourceProxyObject *atlas_source_proxy = Object::cast_to<TileSetAtlasSourceProxyObject>(p_edited);
	if (atlas_source_proxy) {
		Ref<TileSetAtlasSource> atlas_source = atlas_source_proxy->get_edited();
		ERR_FAIL_COND(!atlas_source.is_valid());
		UndoRedo *internal_undo_redo = undo_redo_man->get_history_for_object(atlas_source.ptr()).undo_redo;
		internal_undo_redo->start_force_keep_in_merge_ends();
		PackedVector2Array arr;
		if (p_property == "texture") {
			arr = atlas_source->get_tiles_to_be_removed_on_change(p_new_value, atlas_source->get_margins(), atlas_source->get_separation(), atlas_source->get_texture_region_size());
		} else if (p_property == "margins") {
			arr = atlas_source->get_tiles_to_be_removed_on_change(atlas_source->get_texture(), p_new_value, atlas_source->get_separation(), atlas_source->get_texture_region_size());
		} else if (p_property == "separation") {
			arr = atlas_source->get_tiles_to_be_removed_on_change(atlas_source->get_texture(), atlas_source->get_margins(), p_new_value, atlas_source->get_texture_region_size());
		} else if (p_property == "texture_region_size") {
			arr = atlas_source->get_tiles_to_be_removed_on_change(atlas_source->get_texture(), atlas_source->get_margins(), atlas_source->get_separation(), p_new_value);
		}
		if (!arr.is_empty()) {
			
			List<PropertyInfo> properties;
			atlas_source->get_property_list(&properties);
			for (int i = 0; i < arr.size(); i++) {