Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 15722766 sim1 G T . . AF=0.1;MS=SBS5
1 23853264 sim1 C A . . AF=0.09;MS=SBS5
1 36975466 sim1 C T . . AF=0.19;MS=SBS5
1 41244120 sim1 C T . . AF=0.11;MS=SBS1
1 47715255 sim1 C T . . AF=0.31;MS=SBS1
1 64026864 sim1 TTGGG T . . AF=0.05;MS=DEL
1 72527217 sim1 C T . . AF=0.08;MS=SBS5
1 84050111 sim1 G A . . AF=0.27;MS=SBS5
1 102547172 sim1 A G . . AF=0.13;MS=SBS5
1 103734614 sim1 A G . . AF=0.15;MS=SBS5
1 104387821 sim1 A G . . AF=0.14;MS=SBS5
1 147500162 sim1 A G . . AF=0.11;MS=SBS5
1 157330951 sim1 C T . . AF=0.12;MS=SBS1
1 168030877 sim1 A T . . AF=0.08;MS=SBS5
1 173429365 sim1 A C . . AF=0.12;MS=SBS5
1 174943862 sim1 G A . . AF=0.07;MS=SBS5
1 187815395 sim1 T G . . AF=0.05;MS=SBS5
1 194502146 sim1 G C . . AF=0.3;MS=SBS5
1 222203005 sim1 C T . . AF=0.11;MS=SBS5
1 222585846 sim1 C T . . AF=0.16;MS=SBS5
1 228583786 sim1 TTG T . . AF=0.52;MS=DEL
2 6351777 sim1 C T . . AF=0.05;MS=SBS5
2 29688840 sim1 A G . . AF=0.18;MS=SBS5
2 47458969 sim1 G A . . AF=0.3;MS=SBS5
2 50579257 sim1 G A . . AF=0.14;MS=SBS1
2 59982896 sim1 GG G . . AF=0.09;MS=DEL
2 77404836 sim1 G A . . AF=0.16;MS=SBS5
2 82434805 sim1 C T . . AF=0.29;MS=SBS5
2 85812100 sim1 C T . . AF=0.52;MS=SBS1
2 132770623 sim1 T C . . AF=0.12;MS=SBS5
2 180910366 sim1 C T . . AF=0.28;MS=SBS1
2 200731693 sim1 G A . . AF=0.62;MS=SBS5
2 211019804 sim1 A C . . AF=0.6;MS=SBS5
2 216727695 sim1 T C . . AF=0.15;MS=SBS5
2 222291834 sim1 C A . . AF=0.12;MS=SBS1
3 8929359 sim1 TT T . . AF=0.09;MS=DEL
3 23298085 sim1 TT T . . AF=0.08;MS=DEL
3 77052257 sim1 G A . . AF=0.13;MS=SBS1
3 95403859 sim1 C T . . AF=0.09;MS=SBS1
3 95470058 sim1 C G . . AF=0.06;MS=SBS5
3 95584309 sim1 G A . . AF=0.9;MS=SBS5
3 96230402 sim1 T G . . AF=0.09;MS=SBS5
3 96374599 sim1 A G . . AF=0.22;MS=SBS5
3 98144036 sim1 C A . . AF=0.28;MS=SBS5
3 105488578 sim1 C A . . AF=0.13;MS=SBS5
3 137507867 sim1 C T . . AF=0.15;MS=SBS5
3 161827369 sim1 G A . . AF=0.04;MS=SBS5
3 188957666 sim1 A T . . AF=0.1;MS=SBS5
4 8884531 sim1 G T . . AF=0.3;MS=SBS5
4 12000144 sim1 C G . . AF=0.89;MS=SBS5
4 13547198 sim1 G A . . AF=0.17;MS=SBS1
4 20851190 sim1 G A . . AF=0.1;MS=SBS5
4 29487148 sim1 T C . . AF=0.25;MS=SBS5
4 33771799 sim1 GACTA G . . AF=0.05;MS=DEL
4 35126120 sim1 A T . . AF=0.9;MS=SBS5
4 46145389 sim1 A T . . AF=0.6;MS=SBS5
4 53947697 sim1 A G . . AF=0.09;MS=SBS5
4 65473252 sim1 C T . . AF=0.36;MS=SBS1
4 68184556 sim1 C T . . AF=0.44;MS=SBS1
4 99872364 sim1 G C . . AF=0.12;MS=SBS5
4 108418766 sim1 C T . . AF=0.15;MS=SBS1
4 141739200 sim1 C T . . AF=0.17;MS=SBS1
4 170367989 sim1 A T . . AF=0.15;MS=SBS5
5 4127177 sim1 G C . . AF=0.1;MS=SBS5
5 6474485 sim1 T C . . AF=0.55;MS=SBS5
5 24376585 sim1 A G . . AF=0.14;MS=SBS5
5 28622428 sim1 A C . . AF=0.11;MS=SBS5
5 28816236 sim1 G A . . AF=0.2;MS=SBS5
5 36763733 sim1 G A . . AF=0.36;MS=SBS1
5 44705673 sim1 G A . . AF=0.22;MS=SBS5
5 51744657 sim1 G A . . AF=0.06;MS=SBS1
5 65892066 sim1 T C . . AF=0.19;MS=SBS5
5 104551545 sim1 C T . . AF=0.29;MS=SBS1
5 120962468 sim1 G T . . AF=0.15;MS=SBS5
5 152297310 sim1 T C . . AF=0.17;MS=SBS5
5 164199541 sim1 T C . . AF=0.14;MS=SBS5
5 164239684 sim1 T A . . AF=0.13;MS=SBS5
6 7682617 sim1 T C . . AF=0.49;MS=SBS5
6 11437751 sim1 A T . . AF=0.28;MS=SBS1
6 17689476 sim1 G A . . AF=0.14;MS=SBS5
6 21979279 sim1 T A . . AF=0.88;MS=SBS5
6 39805578 sim1 C A . . AF=0.2;MS=SBS5
6 42628342 sim1 CTTCT C . . AF=0.08;MS=DEL
6 54932565 sim1 G A . . AF=0.12;MS=SBS1
6 62412153 sim1 C T . . AF=0.12;MS=SBS1
6 65683614 sim1 AA A . . AF=0.12;MS=DEL
6 77667811 sim1 C T . . AF=0.16;MS=SBS5
6 95002207 sim1 G T . . AF=0.15;MS=SBS5
6 101288132 sim1 G A . . AF=0.06;MS=SBS5
6 118726955 sim1 C A . . AF=0.15;MS=SBS5
6 139020181 sim1 C A . . AF=0.09;MS=SBS5
7 50808300 sim1 C T . . AF=0.19;MS=SBS1
7 52505401 sim1 TT T . . AF=0.2;MS=DEL
7 57436606 sim1 C T . . AF=0.09;MS=SBS5
7 76666166 sim1 G A . . AF=0.12;MS=SBS5
7 79985846 sim1 G T . . AF=0.1;MS=SBS5
7 81219557 sim1 AA A . . AF=0.27;MS=DEL
7 82384341 sim1 C T . . AF=0.19;MS=SBS5
7 85622063 sim1 C T . . AF=0.35;MS=SBS5
7 91340941 sim1 A G . . AF=0.89;MS=SBS5
7 93325085 sim1 C T . . AF=0.14;MS=SBS5
7 99090966 sim1 G A . . AF=0.48;MS=SBS1
7 100532543 sim1 G A . . AF=0.16;MS=SBS1
7 110848492 sim1 C A . . AF=0.22;MS=SBS5
7 113009026 sim1 T C . . AF=0.36;MS=SBS5
7 120671059 sim1 G A . . AF=0.18;MS=SBS5
7 125623014 sim1 G C . . AF=0.18;MS=SBS5
7 140489186 sim1 G C . . AF=0.27;MS=driver_BRAF_Intron
7 140896348 sim1 A T . . AF=0.11;MS=SBS5
7 142173165 sim1 G T . . AF=0.37;MS=SBS5
7 155800897 sim1 C T . . AF=0.14;MS=SBS5
8 86979439 sim1 G A . . AF=0.08;MS=SBS1
8 105744535 sim1 C T . . AF=0.12;MS=SBS1
8 126377280 sim1 G A . . AF=0.14;MS=SBS5
8 128203873 sim1 G A . . AF=0.14;MS=SBS1
8 137251187 sim1 A T . . AF=0.2;MS=SBS5
9 8121699 sim1 G A . . AF=0.07;MS=SBS1
9 18306106 sim1 CT C . . AF=0.05;MS=DEL
9 25836076 sim1 C T . . AF=0.15;MS=SBS5
9 29280699 sim1 AAAAGT A . . AF=0.09;MS=DEL
9 32898101 sim1 T C . . AF=0.22;MS=SBS5
9 70331763 sim1 A G . . AF=0.11;MS=SBS5
9 75764062 sim1 G T . . AF=0.16;MS=SBS5
9 77826110 sim1 G A . . AF=0.18;MS=SBS1
9 85117916 sim1 GC G . . AF=0.17;MS=DEL
9 103379317 sim1 T C . . AF=0.24;MS=SBS5
9 106445700 sim1 G A . . AF=0.15;MS=SBS5
9 132717507 sim1 T C . . AF=0.12;MS=SBS5
10 4905604 sim1 C T . . AF=0.09;MS=SBS5
10 10115989 sim1 C T . . AF=0.46;MS=SBS1
10 16540297 sim1 C T . . AF=0.08;MS=SBS1
10 35872445 sim1 G T . . AF=0.19;MS=SBS5
10 37438043 sim1 A T . . AF=0.25;MS=SBS5
10 93777370 sim1 C T . . AF=0.11;MS=SBS1
10 94202543 sim1 G T . . AF=0.26;MS=SBS5
10 105454692 sim1 A G . . AF=0.54;MS=SBS5
10 117644310 sim1 AGG A . . AF=0.27;MS=DEL
11 6316052 sim1 T A . . AF=0.28;MS=SBS5
11 34354547 sim1 T A . . AF=0.21;MS=SBS5
11 57023357 sim1 C G . . AF=0.14;MS=SBS5
12 32463398 sim1 T G . . AF=0.1;MS=SBS5
12 55390073 sim1 G A . . AF=0.28;MS=SBS5
12 98308499 sim1 T C . . AF=0.3;MS=SBS5
13 28099003 sim1 A G . . AF=0.07;MS=SBS5
13 33348912 sim1 G A . . AF=0.17;MS=SBS5
13 49826372 sim1 A T . . AF=0.33;MS=SBS5
13 83125197 sim1 A C . . AF=0.13;MS=SBS5
13 89579635 sim1 C T . . AF=0.13;MS=SBS1
13 89657471 sim1 A G . . AF=0.12;MS=SBS5
13 100188642 sim1 G A . . AF=0.15;MS=SBS1
13 103815038 sim1 A G . . AF=0.11;MS=SBS5
13 112069861 sim1 C T . . AF=0.17;MS=SBS5
14 23518338 sim1 C A . . AF=0.29;MS=SBS5
14 43887863 sim1 G C . . AF=0.36;MS=SBS5
14 44364603 sim1 T C . . AF=0.15;MS=SBS5
14 49342560 sim1 T C . . AF=0.12;MS=SBS5
14 60665668 sim1 G C . . AF=0.16;MS=SBS5
14 75123459 sim1 G A . . AF=0.08;MS=SBS1
14 98454335 sim1 C T . . AF=0.17;MS=SBS1
14 101899997 sim1 A G . . AF=0.09;MS=SBS5
15 52850656 sim1 AAAACAA A . . AF=0.1;MS=DEL
15 59060005 sim1 G C . . AF=0.12;MS=SBS5
15 91261801 sim1 A G . . AF=0.17;MS=SBS5
16 23721655 sim1 A T . . AF=0.1;MS=SBS5
16 55081053 sim1 C T . . AF=0.13;MS=SBS5
16 57669967 sim1 C T . . AF=0.28;MS=SBS1
16 60051749 sim1 G A . . AF=0.08;MS=SBS5
16 63703588 sim1 C A . . AF=0.18;MS=SBS1
17 29560044 sim1 AA A . . AF=0.4;MS=driver_NF1_Coding
17 30015132 sim1 G T . . AF=0.18;MS=SBS5
17 48153663 sim1 C T . . AF=0.89;MS=SBS1
17 53088930 sim1 A G . . AF=0.2;MS=SBS5
17 79925235 sim1 G A . . AF=0.11;MS=SBS1
18 27748258 sim1 C CGTAG . . AF=0.16;MS=INS
18 35500741 sim1 C T . . AF=0.09;MS=SBS1
18 49650005 sim1 C T . . AF=0.19;MS=SBS1
18 65024135 sim1 G GG . . AF=0.09;MS=INS
18 69818464 sim1 T A . . AF=0.12;MS=SBS5
19 7478783 sim1 G A . . AF=0.14;MS=SBS1
19 16120104 sim1 G T . . AF=0.06;MS=SBS5
19 57701431 sim1 G T . . AF=0.05;MS=SBS5
20 35956560 sim1 T A . . AF=0.23;MS=SBS5
20 51587038 sim1 T C . . AF=0.1;MS=SBS5
21 20874857 sim1 C T . . AF=0.19;MS=SBS5
X 6070966 sim1 C T . . AF=0.17;MS=SBS5
X 16487486 sim1 G A . . AF=0.22;MS=SBS1
X 66721697 sim1 A T . . AF=0.28;MS=SBS1
X 103545223 sim1 A T . . AF=0.09;MS=SBS5
X 129975543 sim1 G T . . AF=0.2;MS=SBS5
X 143212859 sim1 CT C . . AF=0.28;MS=DEL
X 153163965 sim1 CTT C . . AF=0.1;MS=DEL
Y 9407914 sim1 CC C . . AF=0.25;MS=DEL
Y 13579835 sim1 C T . . AF=0.16;MS=SBS5