Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 44093597 sim100 C T . . AF=0.64;MS=SBS1
1 59187464 sim100 G T . . AF=0.18;MS=SBS5
1 78720078 sim100 G T . . AF=0.4;MS=SBS5
1 86303663 sim100 G A . . AF=0.23;MS=SBS1
1 106467044 sim100 C T . . AF=0.13;MS=SBS5
1 162595831 sim100 G T . . AF=0.37;MS=SBS5
1 179845010 sim100 G T . . AF=0.09;MS=SBS5
1 181196703 sim100 C G . . AF=0.24;MS=SBS5
1 193538462 sim100 G A . . AF=0.17;MS=SBS1
1 195924565 sim100 A T . . AF=0.31;MS=SBS5
1 199789677 sim100 C T . . AF=0.14;MS=SBS1
1 207373614 sim100 G A . . AF=0.12;MS=SBS5
1 223336149 sim100 G A . . AF=0.09;MS=SBS5
1 237933668 sim100 G A . . AF=0.35;MS=SBS1
1 244588918 sim100 C T . . AF=0.1;MS=SBS5
2 32571519 sim100 C T . . AF=0.21;MS=SBS5
2 65050885 sim100 G T . . AF=0.15;MS=SBS5
2 69670275 sim100 A G . . AF=0.11;MS=SBS1
2 75925100 sim100 C T . . AF=0.51;MS=SBS1
2 180359678 sim100 G A . . AF=0.14;MS=SBS5
2 224285234 sim100 T C . . AF=0.28;MS=SBS5
2 237112282 sim100 G A . . AF=0.06;MS=SBS5
3 65780927 sim100 A G . . AF=0.62;MS=SBS5
3 119793925 sim100 C G . . AF=0.1;MS=SBS1
3 147030496 sim100 T G . . AF=0.46;MS=SBS5
3 162755689 sim100 C T . . AF=0.28;MS=SBS5
4 7789842 sim100 C T . . AF=0.18;MS=SBS1
4 34925399 sim100 G A . . AF=0.24;MS=SBS1
4 48377580 sim100 T A . . AF=0.23;MS=SBS5
4 68073363 sim100 A G . . AF=0.45;MS=SBS5
4 75868924 sim100 T C . . AF=0.12;MS=SBS5
4 118579426 sim100 C T . . AF=0.2;MS=SBS1
4 135545756 sim100 T A . . AF=0.17;MS=SBS5
4 148928833 sim100 G C . . AF=0.3;MS=SBS5
4 166584545 sim100 G A . . AF=0.33;MS=SBS5
4 173127429 sim100 A G . . AF=0.35;MS=SBS5
4 181438546 sim100 T A . . AF=0.36;MS=SBS1
5 22906731 sim100 C T . . AF=0.24;MS=SBS1
5 22973213 sim100 G A . . AF=0.11;MS=SBS1
5 26727942 sim100 G A . . AF=0.16;MS=SBS1
5 45650569 sim100 G A . . AF=0.19;MS=SBS1
5 49696225 sim100 AA A . . AF=0.11;MS=DEL
5 53597846 sim100 T C . . AF=0.11;MS=SBS5
5 106415284 sim100 G T . . AF=0.38;MS=SBS5
5 107027876 sim100 C T . . AF=0.1;MS=SBS5
5 130541585 sim100 T A . . AF=0.03;MS=SBS5
5 154862541 sim100 C G . . AF=0.1;MS=SBS5
5 160098917 sim100 G GT . . AF=0.31;MS=INS
5 172359769 sim100 G A . . AF=0.08;MS=SBS5
5 172968179 sim100 G A . . AF=0.38;MS=SBS5
5 177032688 sim100 C T . . AF=0.11;MS=SBS1
6 27686682 sim100 T C . . AF=0.12;MS=SBS5
6 41623892 sim100 C T . . AF=0.06;MS=SBS1
6 48506932 sim100 G C . . AF=0.46;MS=SBS5
6 51180286 sim100 A G . . AF=0.23;MS=SBS5
6 56293016 sim100 G A . . AF=0.42;MS=SBS5
6 80013103 sim100 C G . . AF=0.06;MS=SBS5
6 82140583 sim100 A C . . AF=0.17;MS=SBS5
6 96535105 sim100 A C . . AF=0.34;MS=SBS5
6 118780424 sim100 A T . . AF=0.05;MS=SBS5
6 124541363 sim100 C A . . AF=0.41;MS=SBS5
6 167910154 sim100 C T . . AF=0.53;MS=SBS1
7 1860745 sim100 G T . . AF=0.43;MS=SBS5
7 62502293 sim100 C T . . AF=0.18;MS=SBS5
7 62943209 sim100 G T . . AF=0.08;MS=SBS5
7 63386859 sim100 T C . . AF=0.38;MS=SBS5
7 86642277 sim100 G C . . AF=0.3;MS=SBS5
7 90128235 sim100 G A . . AF=0.38;MS=SBS5
7 91648884 sim100 G A . . AF=0.05;MS=SBS5
7 116718304 sim100 A G . . AF=0.31;MS=SBS5
7 121398131 sim100 A T . . AF=0.11;MS=SBS5
7 140454968 sim100 G T . . AF=0.22;MS=driver_BRAF_Intron
8 2365645 sim100 A G . . AF=0.06;MS=SBS5
8 14196183 sim100 T G . . AF=0.09;MS=SBS1
8 28778622 sim100 C T . . AF=0.22;MS=SBS1
8 66023849 sim100 G A . . AF=0.29;MS=SBS1
8 87579778 sim100 G A . . AF=0.23;MS=SBS5
8 89869398 sim100 T C . . AF=0.23;MS=SBS5
8 143829813 sim100 A G . . AF=0.08;MS=SBS1
8 144728781 sim100 T C . . AF=0.26;MS=SBS5
9 10284104 sim100 A G . . AF=0.08;MS=SBS5
9 11804237 sim100 C G . . AF=0.12;MS=SBS5
9 22278074 sim100 T G . . AF=0.22;MS=SBS5
9 78150745 sim100 G T . . AF=0.13;MS=SBS5
9 96073931 sim100 G A . . AF=0.26;MS=SBS1
9 130778355 sim100 T C . . AF=0.26;MS=SBS5
10 43362053 sim100 G A . . AF=0.17;MS=SBS5
10 85647220 sim100 A G . . AF=0.13;MS=SBS5
10 104592956 sim100 G A . . AF=0.21;MS=SBS5
10 110811622 sim100 T C . . AF=0.42;MS=SBS5
10 127891969 sim100 G A . . AF=0.12;MS=SBS1
11 22739440 sim100 G C . . AF=0.65;MS=SBS5
11 25747862 sim100 G A . . AF=0.29;MS=SBS1
11 43387770 sim100 A G . . AF=0.05;MS=SBS5
12 30062296 sim100 A T . . AF=0.46;MS=SBS5
12 61621500 sim100 A C . . AF=0.19;MS=SBS5
12 64420323 sim100 G A . . AF=0.09;MS=SBS1
12 65476412 sim100 A G . . AF=0.14;MS=SBS5
12 85606681 sim100 A C . . AF=0.14;MS=SBS5
12 104637508 sim100 G A . . AF=0.32;MS=SBS5
12 132825372 sim100 T C . . AF=0.07;MS=SBS5
13 21806718 sim100 C T . . AF=0.14;MS=SBS1
13 21871654 sim100 A T . . AF=0.63;MS=SBS5
13 29348202 sim100 G A . . AF=0.25;MS=SBS1
13 68597955 sim100 C T . . AF=0.05;MS=SBS1
13 94009995 sim100 G A . . AF=0.1;MS=SBS5
14 20560545 sim100 C T . . AF=0.09;MS=SBS5
14 51858824 sim100 C G . . AF=0.12;MS=SBS5
14 100132046 sim100 C G . . AF=0.15;MS=SBS5
15 36944910 sim100 G A . . AF=0.16;MS=SBS5
15 46800354 sim100 A C . . AF=0.11;MS=SBS5
15 63931409 sim100 A G . . AF=0.11;MS=SBS5
16 593103 sim100 C T . . AF=0.3;MS=SBS5
16 17545877 sim100 G A . . AF=0.3;MS=SBS1
16 18438918 sim100 C T . . AF=0.27;MS=SBS1
16 32424675 sim100 C T . . AF=0.09;MS=SBS1
16 32591407 sim100 C T . . AF=0.39;MS=SBS5
16 56250382 sim100 C T . . AF=0.11;MS=SBS5
16 59828595 sim100 G A . . AF=0.09;MS=SBS5
17 2426723 sim100 G T . . AF=0.1;MS=SBS5
17 14509422 sim100 C T . . AF=0.27;MS=SBS1
17 26933379 sim100 G A . . AF=0.1;MS=SBS1
18 34290674 sim100 G A . . AF=0.41;MS=SBS5
18 37263616 sim100 G A . . AF=0.14;MS=SBS5
18 37732785 sim100 T C . . AF=0.21;MS=SBS5
18 40046930 sim100 C A . . AF=0.31;MS=SBS5
19 3217680 sim100 C T . . AF=0.08;MS=SBS1
19 28811680 sim100 G A . . AF=0.21;MS=SBS5
19 45610406 sim100 C A . . AF=0.32;MS=SBS5
20 36446572 sim100 A G . . AF=0.09;MS=SBS5
21 14489148 sim100 G T . . AF=0.63;MS=SBS5
21 24556770 sim100 G A . . AF=0.1;MS=SBS5
22 26788452 sim100 G A . . AF=0.41;MS=SBS5
X 3565997 sim100 T C . . AF=0.05;MS=SBS5
X 11037908 sim100 T C . . AF=0.14;MS=SBS5
X 14965762 sim100 A G . . AF=0.43;MS=SBS5
X 21163095 sim100 A G . . AF=0.38;MS=SBS5
X 23925588 sim100 G T . . AF=0.35;MS=SBS5
X 24608398 sim100 G A . . AF=0.42;MS=SBS1
X 25577152 sim100 C A . . AF=0.37;MS=SBS5
X 40074898 sim100 G A . . AF=0.33;MS=SBS5
X 64706667 sim100 G A . . AF=0.3;MS=SBS5
X 80861920 sim100 C T . . AF=0.03;MS=SBS5
X 84526775 sim100 C T . . AF=0.21;MS=SBS1
X 95928992 sim100 G A . . AF=0.12;MS=SBS5
X 100482963 sim100 G C . . AF=0.26;MS=SBS5
X 116767324 sim100 G A . . AF=0.12;MS=SBS5
X 131039865 sim100 A G . . AF=0.33;MS=SBS5
X 145823439 sim100 G C . . AF=0.51;MS=SBS5