Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 104681320 sim19 C T . . AF=0.18;MS=SBS1
1 105439679 sim19 G T . . AF=0.09;MS=SBS5
1 112225387 sim19 C T . . AF=0.08;MS=SBS1
1 165128021 sim19 C T . . AF=0.47;MS=SBS5
1 244828732 sim19 C G . . AF=0.27;MS=SBS5
2 704330 sim19 T A . . AF=0.15;MS=SBS5
2 109829152 sim19 C T . . AF=0.65;MS=SBS1
2 116267929 sim19 C A . . AF=0.21;MS=SBS5
2 121412171 sim19 C T . . AF=0.17;MS=SBS5
2 158088312 sim19 T G . . AF=0.44;MS=SBS5
2 190681202 sim19 C T . . AF=0.28;MS=SBS5
2 208079808 sim19 C T . . AF=0.12;MS=SBS5
3 43419191 sim19 G A . . AF=0.21;MS=SBS1
3 89843433 sim19 C T . . AF=0.09;MS=SBS1
3 121881538 sim19 T C . . AF=0.54;MS=SBS5
4 12130263 sim19 G A . . AF=0.11;MS=SBS5
4 59532946 sim19 C T . . AF=0.25;MS=SBS5
4 62476985 sim19 A G . . AF=0.39;MS=SBS5
4 67737231 sim19 C T . . AF=0.14;MS=SBS5
4 68042262 sim19 C G . . AF=0.14;MS=SBS5
4 133747913 sim19 C T . . AF=0.26;MS=SBS1
4 153762973 sim19 TT T . . AF=0.23;MS=DEL
4 171016765 sim19 C T . . AF=0.36;MS=SBS5
5 8604754 sim19 C G . . AF=0.26;MS=SBS5
5 22065790 sim19 C T . . AF=0.11;MS=SBS5
5 27230433 sim19 G A . . AF=0.12;MS=SBS1
5 29151777 sim19 AATC A . . AF=0.01;MS=DEL
5 32332561 sim19 T C . . AF=0.07;MS=SBS1
5 37346754 sim19 CA C . . AF=0.13;MS=DEL
5 45174154 sim19 A G . . AF=0.19;MS=SBS5
5 63186251 sim19 G A . . AF=0.1;MS=SBS5
5 168738982 sim19 CTG C . . AF=0.11;MS=DEL
6 908413 sim19 G T . . AF=0.3;MS=SBS1
6 8482894 sim19 A T . . AF=0.23;MS=SBS5
6 33550085 sim19 G T . . AF=0.25;MS=SBS5
6 92921512 sim19 A G . . AF=0.1;MS=SBS5
6 99785971 sim19 G A . . AF=0.12;MS=SBS1
6 113694330 sim19 T G . . AF=0.17;MS=SBS1
6 126124876 sim19 A T . . AF=0.31;MS=SBS5
6 150849397 sim19 G A . . AF=0.01;MS=SBS1
7 3241246 sim19 C CT . . AF=0.42;MS=INS
7 15815836 sim19 T C . . AF=0.2;MS=SBS5
7 20636041 sim19 C A . . AF=0.01;MS=SBS5
7 23600071 sim19 TC AG . . AF=0.18;MS=DNP
7 26063237 sim19 C T . . AF=0.37;MS=SBS1
7 57696913 sim19 C A . . AF=0.43;MS=SBS5
7 71376265 sim19 G A . . AF=0.31;MS=SBS1
7 94789356 sim19 TT T . . AF=0.11;MS=DEL
7 117805696 sim19 T C . . AF=0.23;MS=SBS5
7 125755267 sim19 A G . . AF=0.32;MS=SBS5
7 139535830 sim19 T G . . AF=0.12;MS=SBS5
7 140291984 sim19 C T . . AF=0.12;MS=SBS1
8 9550493 sim19 G A . . AF=0.28;MS=SBS1
8 13360940 sim19 G T . . AF=0.26;MS=SBS1
8 81568263 sim19 T C . . AF=0.45;MS=SBS5
8 113953722 sim19 C T . . AF=0.09;MS=SBS1
8 131560506 sim19 G A . . AF=0.31;MS=SBS1
9 1896397 sim19 C G . . AF=0.12;MS=SBS5
9 17978200 sim19 TG GA . . AF=0.35;MS=DNP
9 29060458 sim19 A G . . AF=0.28;MS=SBS5
9 29281603 sim19 G A . . AF=0.51;MS=SBS1
9 30227551 sim19 C CG . . AF=0.19;MS=INS
9 89317007 sim19 G T . . AF=0.3;MS=SBS5
10 34114654 sim19 C T . . AF=0.19;MS=SBS5
10 87107406 sim19 C G . . AF=0.21;MS=SBS5
11 11096712 sim19 A T . . AF=0.16;MS=SBS5
11 90360115 sim19 C T . . AF=0.12;MS=SBS5
11 96261488 sim19 T G . . AF=0.09;MS=SBS5
12 6953877 sim19 G A . . AF=0.35;MS=SBS1
12 34293067 sim19 A C . . AF=0.3;MS=SBS5
12 85455250 sim19 A T . . AF=0.25;MS=SBS5
12 112011285 sim19 C T . . AF=0.39;MS=SBS1
12 121258335 sim19 G A . . AF=0.16;MS=SBS5
13 24177408 sim19 C T . . AF=0.11;MS=SBS5
13 45260411 sim19 C T . . AF=0.27;MS=SBS1
13 51844847 sim19 T C . . AF=0.47;MS=SBS5
13 72627985 sim19 T A . . AF=0.21;MS=SBS5
13 103035852 sim19 T C . . AF=0.17;MS=SBS5
13 113548705 sim19 G A . . AF=0.11;MS=SBS1
14 28428294 sim19 T G . . AF=0.26;MS=SBS5
14 31465740 sim19 T C . . AF=0.18;MS=SBS5
14 45177858 sim19 C T . . AF=0.12;MS=SBS1
14 83568381 sim19 C T . . AF=0.08;MS=SBS1
15 20243602 sim19 G T . . AF=0.4;MS=SBS5
15 56170125 sim19 A C . . AF=0.18;MS=SBS5
16 20244607 sim19 C A . . AF=0.06;MS=SBS5
16 31337119 sim19 G T . . AF=0.08;MS=SBS5
16 32195578 sim19 G A . . AF=0.29;MS=SBS1
16 34513815 sim19 G T . . AF=0.08;MS=SBS5
16 35087150 sim19 T C . . AF=0.12;MS=SBS5
16 70588973 sim19 G A . . AF=0.09;MS=SBS1
17 8084435 sim19 C G . . AF=0.33;MS=SBS5
18 54477519 sim19 A T . . AF=0.08;MS=SBS5
18 70095354 sim19 G A . . AF=0.12;MS=SBS1
18 70357028 sim19 C T . . AF=0.2;MS=SBS5
19 16813214 sim19 C T . . AF=0.24;MS=SBS1
19 55483438 sim19 G A . . AF=0.27;MS=SBS1
20 11326351 sim19 C A . . AF=0.22;MS=SBS5
21 34575602 sim19 T C . . AF=0.37;MS=SBS5
21 41975241 sim19 A T . . AF=0.2;MS=SBS5
21 46167666 sim19 TT T . . AF=0.23;MS=DEL
X 16617429 sim19 G A . . AF=0.31;MS=SBS1
X 84670837 sim19 G T . . AF=0.24;MS=SBS5
X 96469557 sim19 C T . . AF=0.39;MS=SBS1
X 122731550 sim19 A G . . AF=0.26;MS=SBS5
X 137673280 sim19 C T . . AF=0.32;MS=SBS1
X 142941042 sim19 G A . . AF=0.72;MS=SBS1
X 146650783 sim19 A G . . AF=0.25;MS=SBS1
X 148431374 sim19 C T . . AF=0.4;MS=SBS1