Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 30214003 sim22 C T . . AF=0.18;MS=SBS1
1 98812331 sim22 A G . . AF=0.59;MS=SBS5
1 102621630 sim22 C A . . AF=0.46;MS=SBS5
1 105849872 sim22 C T . . AF=0.13;MS=SBS5
1 117283502 sim22 G A . . AF=0.29;MS=SBS1
1 119858971 sim22 C T . . AF=0.25;MS=SBS1
1 165111203 sim22 C A . . AF=0.59;MS=SBS5
1 171588944 sim22 CTA C . . AF=0.34;MS=DEL
1 180616763 sim22 C T . . AF=0.05;MS=SBS1
1 186917291 sim22 G A . . AF=0.56;MS=SBS1
1 193794725 sim22 C G . . AF=0.24;MS=SBS5
1 236991092 sim22 G A . . AF=0.33;MS=SBS5
2 14876884 sim22 T C . . AF=0.33;MS=SBS5
2 20079078 sim22 G T . . AF=0.1;MS=SBS5
2 35509809 sim22 T A . . AF=0.14;MS=SBS5
2 67286919 sim22 G A . . AF=0.21;MS=SBS1
2 90469021 sim22 T A . . AF=0.05;MS=SBS5
2 127136327 sim22 G A . . AF=0.09;MS=SBS5
2 128342274 sim22 C T . . AF=0.29;MS=SBS5
2 131071421 sim22 C A . . AF=0.34;MS=SBS5
2 141982903 sim22 G T . . AF=0.69;MS=SBS5
2 145410786 sim22 C G . . AF=0.22;MS=SBS5
2 149933436 sim22 T G . . AF=0.4;MS=SBS5
2 154191903 sim22 G A . . AF=0.24;MS=SBS1
2 166076970 sim22 C A . . AF=0.33;MS=SBS5
2 196259838 sim22 G A . . AF=0.08;MS=SBS5
3 18533528 sim22 A AT . . AF=0.08;MS=INS
3 44018671 sim22 G A . . AF=0.31;MS=SBS5
3 79211721 sim22 G A . . AF=0.15;MS=SBS5
3 101389896 sim22 G A . . AF=0.08;MS=SBS1
3 105284183 sim22 A G . . AF=0.16;MS=SBS5
3 150517094 sim22 C G . . AF=0.42;MS=SBS5
3 178697526 sim22 A G . . AF=0.27;MS=SBS5
3 179043219 sim22 G C . . AF=0.19;MS=SBS5
3 185771028 sim22 T TA . . AF=0.09;MS=INS
3 187900796 sim22 A G . . AF=0.08;MS=SBS5
3 195259876 sim22 C T . . AF=0.42;MS=SBS1
4 19667549 sim22 G T . . AF=0.35;MS=SBS5
4 29850374 sim22 C T . . AF=0.33;MS=SBS1
4 30792898 sim22 A G . . AF=0.02;MS=SBS5
4 32188383 sim22 C T . . AF=0.36;MS=SBS5
4 49628180 sim22 A G . . AF=0.38;MS=SBS5
4 61380208 sim22 G A . . AF=0.4;MS=SBS1
4 72033650 sim22 T G . . AF=0.14;MS=SBS5
4 105643101 sim22 C A . . AF=0.41;MS=SBS5
4 128732068 sim22 TT T . . AF=0.3;MS=DEL
4 140360442 sim22 C T . . AF=0.31;MS=SBS5
4 145415721 sim22 T A . . AF=0.04;MS=SBS1
4 146792045 sim22 G C . . AF=0.15;MS=SBS5
4 163219871 sim22 T C . . AF=0.09;MS=SBS5
4 177145999 sim22 C A . . AF=0.08;MS=SBS5
5 25164414 sim22 G C . . AF=0.08;MS=SBS5
5 28851874 sim22 G A . . AF=0.21;MS=SBS1
5 46396503 sim22 G T . . AF=0.35;MS=SBS5
5 51769108 sim22 G A . . AF=0.13;MS=SBS5
5 53153540 sim22 A T . . AF=0.24;MS=SBS5
5 62267530 sim22 C T . . AF=0.15;MS=SBS5
5 81011256 sim22 AA A . . AF=0.37;MS=DEL
5 89523061 sim22 C G . . AF=0.38;MS=SBS5
5 93058388 sim22 A T . . AF=0.08;MS=SBS5
5 96060195 sim22 A G . . AF=0.11;MS=SBS5
5 111071729 sim22 C T . . AF=0.44;MS=SBS1
5 137626679 sim22 G A . . AF=0.08;MS=SBS5
5 162462863 sim22 G A . . AF=0.16;MS=SBS1
5 179438402 sim22 A T . . AF=0.14;MS=SBS5
6 26276594 sim22 C A . . AF=0.4;MS=SBS5
6 76674871 sim22 A G . . AF=0.3;MS=SBS5
6 80699369 sim22 A C . . AF=0.07;MS=SBS5
6 95589407 sim22 C T . . AF=0.21;MS=SBS1
6 134735678 sim22 A G . . AF=0.33;MS=SBS5
6 158341927 sim22 C A . . AF=0.28;MS=SBS5
7 1944664 sim22 C A . . AF=0.19;MS=SBS5
7 2827668 sim22 AATCCCAGCTG A . . AF=0.53;MS=DEL
7 54291696 sim22 G A . . AF=0.47;MS=SBS1
7 80485145 sim22 G A . . AF=0.06;MS=SBS5
7 81593998 sim22 G T . . AF=0.28;MS=SBS5
7 83692214 sim22 C G . . AF=0.2;MS=SBS5
7 90798446 sim22 C G . . AF=0.12;MS=SBS5
7 97712025 sim22 G T . . AF=0.15;MS=SBS5
7 98384907 sim22 T C . . AF=0.13;MS=SBS5
7 111098994 sim22 G T . . AF=0.14;MS=SBS5
7 128609096 sim22 C T . . AF=0.17;MS=SBS5
7 140445617 sim22 C T . . AF=0.39;MS=driver_BRAF_Intron
8 28173993 sim22 G A . . AF=0.1;MS=SBS1
8 39138127 sim22 C T . . AF=0.08;MS=SBS5
8 48680662 sim22 G A . . AF=0.08;MS=SBS1
8 55968931 sim22 G A . . AF=0.23;MS=SBS1
8 71924298 sim22 GGAAATTG G . . AF=0.14;MS=DEL
8 123765298 sim22 C A . . AF=0.19;MS=SBS1
8 125245643 sim22 G A . . AF=0.34;MS=SBS5
9 26214754 sim22 T C . . AF=0.29;MS=SBS5
9 28364683 sim22 G A . . AF=0.1;MS=SBS1
9 30130596 sim22 C CC . . AF=0.51;MS=INS
9 77586291 sim22 C T . . AF=0.24;MS=SBS5
9 103783331 sim22 A T . . AF=0.34;MS=SBS5
9 119614416 sim22 G A . . AF=0.32;MS=SBS5
9 136702648 sim22 G A . . AF=0.11;MS=SBS1
10 6703062 sim22 G T . . AF=0.23;MS=SBS5
10 9455952 sim22 T G . . AF=0.34;MS=SBS5
10 73042808 sim22 C T . . AF=0.32;MS=SBS1
10 92721685 sim22 C T . . AF=0.17;MS=SBS5
10 97608303 sim22 G A . . AF=0.34;MS=SBS5
10 107529920 sim22 G A . . AF=0.33;MS=SBS1
10 115418365 sim22 C T . . AF=0.12;MS=SBS1
11 8651179 sim22 A G . . AF=0.36;MS=SBS5
11 11875041 sim22 G A . . AF=0.37;MS=SBS1
11 16733439 sim22 C T . . AF=0.06;MS=SBS5
11 19360492 sim22 A C . . AF=0.27;MS=SBS5
11 87920883 sim22 C T . . AF=0.12;MS=SBS5
11 95854849 sim22 G T . . AF=0.4;MS=SBS5
12 19847315 sim22 A G . . AF=0.0;MS=SBS5
12 73343211 sim22 A G . . AF=0.18;MS=SBS5
12 76027922 sim22 C T . . AF=0.17;MS=SBS5
12 83960390 sim22 G A . . AF=0.09;MS=SBS5
12 89568141 sim22 A C . . AF=0.08;MS=SBS5
12 93012854 sim22 T A . . AF=0.08;MS=SBS5
12 116454996 sim22 G A . . AF=0.09;MS=SBS5
12 117046861 sim22 G A . . AF=0.18;MS=SBS1
13 36455718 sim22 G C . . AF=0.09;MS=SBS5
13 55534809 sim22 T G . . AF=0.11;MS=SBS5
13 82722295 sim22 C T . . AF=0.08;MS=SBS5
14 60673586 sim22 G T . . AF=0.41;MS=SBS5
15 20055991 sim22 C T . . AF=0.13;MS=SBS5
15 23691636 sim22 T C . . AF=0.11;MS=SBS5
15 51919410 sim22 T C . . AF=0.43;MS=SBS5
15 65296943 sim22 C T . . AF=0.12;MS=SBS1
15 67681621 sim22 C T . . AF=0.13;MS=SBS5
15 83369543 sim22 A G . . AF=0.07;MS=SBS5
16 32560539 sim22 C A . . AF=0.37;MS=SBS5
16 33792046 sim22 T C . . AF=0.12;MS=SBS5
16 34859861 sim22 G C . . AF=0.3;MS=SBS5
16 52303394 sim22 G A . . AF=0.1;MS=SBS5
17 69962741 sim22 G A . . AF=0.3;MS=SBS1
18 3248030 sim22 T C . . AF=0.14;MS=SBS5
18 5741890 sim22 G A . . AF=0.21;MS=SBS5
18 35223579 sim22 A T . . AF=0.41;MS=SBS5
19 33671988 sim22 C T . . AF=0.34;MS=SBS1
21 25275554 sim22 G T . . AF=0.07;MS=SBS5
22 33180665 sim22 G A . . AF=0.4;MS=SBS5
22 37107907 sim22 G A . . AF=0.32;MS=SBS1
X 7931858 sim22 G A . . AF=0.26;MS=SBS1
X 9960748 sim22 C T . . AF=0.24;MS=SBS1
X 32998101 sim22 C A . . AF=0.31;MS=SBS5
X 39420621 sim22 G A . . AF=0.5;MS=SBS1
X 44720207 sim22 C T . . AF=0.01;MS=SBS1
X 47639625 sim22 C T . . AF=0.1;MS=SBS5
X 53866885 sim22 T C . . AF=0.05;MS=SBS5
X 63196290 sim22 G C . . AF=0.11;MS=SBS5
X 64660121 sim22 A G . . AF=0.33;MS=SBS1
X 66197419 sim22 G A . . AF=0.09;MS=SBS5
X 66465970 sim22 G A . . AF=0.64;MS=SBS5
X 68273596 sim22 C G . . AF=0.32;MS=SBS5
X 70870223 sim22 CA C . . AF=0.16;MS=DEL
X 77744062 sim22 T A . . AF=0.09;MS=SBS5
X 96672817 sim22 C A . . AF=0.52;MS=SBS1
X 98899030 sim22 C T . . AF=0.36;MS=SBS5
X 98985421 sim22 TT T . . AF=0.09;MS=DEL
X 105499006 sim22 A T . . AF=0.3;MS=SBS5
X 108567541 sim22 T C . . AF=0.09;MS=SBS5
X 114703460 sim22 C T . . AF=0.14;MS=SBS1
X 118188047 sim22 G A . . AF=0.25;MS=SBS5
X 119320831 sim22 C T . . AF=0.09;MS=SBS5
X 124121467 sim22 G A . . AF=0.21;MS=SBS1
X 140515497 sim22 A T . . AF=0.48;MS=SBS5
X 143749880 sim22 C T . . AF=0.41;MS=SBS5
X 144746503 sim22 T C . . AF=0.43;MS=SBS5
X 146394656 sim22 G A . . AF=0.12;MS=SBS5
X 147271441 sim22 A G . . AF=0.09;MS=SBS5
X 151407362 sim22 CTTCA C . . AF=0.11;MS=DEL