Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 6451585 sim26 A T . . AF=0.08;MS=SBS5
1 9998059 sim26 A G . . AF=0.26;MS=SBS5
1 107180319 sim26 C T . . AF=0.3;MS=SBS1
1 167584772 sim26 A G . . AF=0.52;MS=SBS5
1 185782268 sim26 C G . . AF=0.14;MS=SBS5
1 189035130 sim26 G T . . AF=0.28;MS=SBS5
1 215047632 sim26 G A . . AF=0.1;MS=SBS5
1 243458307 sim26 C A . . AF=0.42;MS=SBS5
2 68860870 sim26 C A . . AF=0.09;MS=SBS5
2 85195424 sim26 G A . . AF=0.1;MS=SBS5
2 113487167 sim26 C T . . AF=0.2;MS=SBS1
2 143783910 sim26 A C . . AF=0.08;MS=SBS5
2 150007708 sim26 C T . . AF=0.25;MS=SBS1
2 169352829 sim26 A T . . AF=0.63;MS=SBS1
2 204796141 sim26 A G . . AF=0.26;MS=SBS5
3 29885113 sim26 C T . . AF=0.11;MS=SBS5
3 84915570 sim26 A G . . AF=0.3;MS=SBS5
3 87542862 sim26 A T . . AF=0.33;MS=SBS5
3 132835439 sim26 C T . . AF=0.21;MS=SBS1
3 152910333 sim26 G T . . AF=0.09;MS=SBS5
3 174177915 sim26 T A . . AF=0.11;MS=SBS5
4 896349 sim26 G A . . AF=0.23;MS=SBS1
4 7600254 sim26 G A . . AF=0.1;MS=SBS5
4 66933857 sim26 A T . . AF=0.09;MS=SBS5
4 67628935 sim26 C T . . AF=0.54;MS=SBS1
4 68769190 sim26 GG G . . AF=0.22;MS=DEL
4 106560136 sim26 GA G . . AF=0.33;MS=DEL
4 108809157 sim26 G C . . AF=0.08;MS=SBS5
4 122156847 sim26 C T . . AF=0.11;MS=SBS5
4 131471478 sim26 G A . . AF=0.35;MS=SBS5
4 160261438 sim26 C A . . AF=0.26;MS=SBS5
4 161746174 sim26 C T . . AF=0.3;MS=SBS1
4 166987265 sim26 G A . . AF=0.22;MS=SBS1
4 180717354 sim26 A C . . AF=0.33;MS=SBS5
4 185599808 sim26 A G . . AF=0.09;MS=SBS5
5 32255490 sim26 C T . . AF=0.15;MS=SBS1
5 35038676 sim26 C T . . AF=0.13;MS=SBS5
5 96099557 sim26 T C . . AF=0.35;MS=SBS5
5 104612081 sim26 T C . . AF=0.23;MS=SBS5
5 123612985 sim26 G T . . AF=0.13;MS=SBS5
5 129943440 sim26 C A . . AF=0.36;MS=SBS5
5 153772564 sim26 TT T . . AF=0.27;MS=DEL
6 49340537 sim26 C T . . AF=0.18;MS=SBS5
6 86796130 sim26 A G . . AF=0.13;MS=SBS5
6 142787878 sim26 G A . . AF=0.19;MS=SBS1
6 168996206 sim26 A G . . AF=0.12;MS=SBS5
7 111247454 sim26 A C . . AF=0.15;MS=SBS5
7 127743249 sim26 T C . . AF=0.39;MS=SBS5
7 140450920 sim26 T G . . AF=0.11;MS=driver_BRAF_Intron
7 152935186 sim26 C T . . AF=0.29;MS=SBS5
8 13570619 sim26 T C . . AF=0.11;MS=SBS5
8 22501113 sim26 AC A . . AF=0.21;MS=DEL
8 39656780 sim26 G A . . AF=0.17;MS=SBS5
8 66113982 sim26 A T . . AF=0.58;MS=SBS5
8 138754074 sim26 T C . . AF=0.04;MS=SBS5
9 2964209 sim26 G A . . AF=0.26;MS=SBS1
9 6324675 sim26 G A . . AF=0.16;MS=SBS5
9 12739486 sim26 A T . . AF=0.08;MS=SBS5
9 19752567 sim26 G A . . AF=0.22;MS=SBS5
9 75841675 sim26 C A . . AF=0.15;MS=SBS5
9 121776765 sim26 T C . . AF=0.09;MS=SBS5
9 132111282 sim26 G A . . AF=0.23;MS=SBS1
10 27802548 sim26 G A . . AF=0.3;MS=SBS5
10 110278395 sim26 C T . . AF=0.11;MS=SBS5
11 10363183 sim26 C T . . AF=0.42;MS=SBS1
11 18962635 sim26 A T . . AF=0.08;MS=SBS5
11 19528896 sim26 T G . . AF=0.09;MS=SBS5
11 47714626 sim26 C T . . AF=0.22;MS=SBS5
11 83371131 sim26 G T . . AF=0.3;MS=SBS5
11 96820781 sim26 AGA A . . AF=0.15;MS=DEL
11 102402941 sim26 C T . . AF=0.2;MS=SBS5
11 120309902 sim26 C T . . AF=0.17;MS=SBS1
11 129540401 sim26 G A . . AF=0.18;MS=SBS5
12 17022443 sim26 C G . . AF=0.17;MS=SBS5
12 54179089 sim26 C A . . AF=0.35;MS=SBS5
12 72366371 sim26 C G . . AF=0.12;MS=SBS5
12 131146309 sim26 AACT A . . AF=0.06;MS=DEL
13 60438787 sim26 A G . . AF=0.08;MS=SBS5
13 85325371 sim26 G A . . AF=0.32;MS=SBS1
13 99150352 sim26 A T . . AF=0.21;MS=SBS5
14 45137997 sim26 G T . . AF=0.17;MS=SBS5
14 91661781 sim26 A G . . AF=0.1;MS=SBS5
15 46681126 sim26 C A . . AF=0.12;MS=SBS5
16 86479948 sim26 A C . . AF=0.13;MS=SBS5
17 1118901 sim26 C T . . AF=0.06;MS=SBS5
17 2781240 sim26 G C . . AF=0.19;MS=SBS5
17 47233457 sim26 CA C . . AF=0.19;MS=DEL
18 55651011 sim26 C A . . AF=0.12;MS=SBS5
19 57057127 sim26 G T . . AF=0.24;MS=SBS5
20 50321720 sim26 A G . . AF=0.29;MS=SBS5
21 20368697 sim26 A G . . AF=0.17;MS=SBS1
21 21961319 sim26 A T . . AF=0.24;MS=SBS5
22 27365790 sim26 C CC . . AF=0.57;MS=INS
22 28083920 sim26 G A . . AF=0.28;MS=SBS5
22 31498132 sim26 C A . . AF=0.38;MS=SBS5
X 4896265 sim26 C A . . AF=0.26;MS=SBS5
X 52989195 sim26 A G . . AF=0.19;MS=SBS5
X 86160073 sim26 A C . . AF=0.22;MS=SBS5
X 92196441 sim26 T A . . AF=0.25;MS=SBS5
X 96143248 sim26 C T . . AF=0.17;MS=SBS1
X 122656687 sim26 G A . . AF=0.12;MS=SBS5
X 127699499 sim26 A T . . AF=0.18;MS=SBS5
X 139341381 sim26 A T . . AF=0.33;MS=SBS5