Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 24286724 sim45 G A . . AF=0.18;MS=SBS1
1 48010139 sim45 C T . . AF=0.26;MS=SBS1
1 72380132 sim45 G C . . AF=0.28;MS=SBS5
1 190392793 sim45 T G . . AF=0.06;MS=SBS5
1 213651981 sim45 T G . . AF=0.67;MS=SBS5
1 232377691 sim45 T A . . AF=0.12;MS=SBS1
1 242725115 sim45 G A . . AF=0.25;MS=SBS1
2 18362454 sim45 C G . . AF=0.05;MS=SBS5
2 29818878 sim45 C T . . AF=0.1;MS=SBS1
2 35109842 sim45 C T . . AF=0.23;MS=SBS5
2 82529367 sim45 T C . . AF=0.03;MS=SBS5
2 86905560 sim45 C T . . AF=0.09;MS=SBS1
2 136448342 sim45 T A . . AF=0.37;MS=SBS5
2 153983555 sim45 T TT . . AF=0.2;MS=INS
2 163994156 sim45 A T . . AF=0.46;MS=SBS5
2 182372515 sim45 C CA . . AF=0.22;MS=INS
2 189483631 sim45 G T . . AF=0.39;MS=SBS1
2 196856258 sim45 A G . . AF=0.49;MS=SBS5
2 200731768 sim45 C T . . AF=0.3;MS=SBS5
3 45778055 sim45 T C . . AF=0.16;MS=SBS5
3 64578757 sim45 C T . . AF=0.28;MS=SBS5
3 83849031 sim45 G A . . AF=0.13;MS=SBS5
3 103249167 sim45 G A . . AF=0.22;MS=SBS5
3 104456237 sim45 C A . . AF=0.48;MS=SBS5
3 192926113 sim45 T C . . AF=0.22;MS=SBS5
4 28715709 sim45 T C . . AF=0.43;MS=SBS5
4 44878339 sim45 G T . . AF=0.15;MS=SBS5
4 46239689 sim45 A C . . AF=0.29;MS=SBS5
4 47947541 sim45 G A . . AF=0.1;MS=SBS1
4 112369054 sim45 T A . . AF=0.23;MS=SBS5
4 113184636 sim45 C T . . AF=0.32;MS=SBS5
4 138308561 sim45 C T . . AF=0.34;MS=SBS1
4 146424834 sim45 C G . . AF=0.3;MS=SBS5
4 152227829 sim45 G A . . AF=0.31;MS=SBS5
4 171368526 sim45 A G . . AF=0.13;MS=SBS1
4 171494878 sim45 A T . . AF=0.34;MS=SBS5
4 184385561 sim45 C T . . AF=0.33;MS=SBS1
5 11912582 sim45 C T . . AF=0.17;MS=SBS1
5 13295453 sim45 G A . . AF=0.49;MS=SBS5
5 22977108 sim45 A C . . AF=0.15;MS=SBS5
5 37117235 sim45 C T . . AF=0.12;MS=SBS5
5 52655114 sim45 G A . . AF=0.31;MS=SBS5
5 72857690 sim45 G C . . AF=0.22;MS=SBS5
5 85733040 sim45 A AAAA . . AF=0.12;MS=INS
5 95725505 sim45 G A . . AF=0.19;MS=SBS1
5 112243362 sim45 A G . . AF=0.35;MS=SBS5
5 143773982 sim45 G A . . AF=0.11;MS=SBS1
5 156574166 sim45 G C . . AF=0.16;MS=SBS5
5 171317358 sim45 CT C . . AF=0.45;MS=DEL
6 10020866 sim45 C T . . AF=0.26;MS=SBS1
6 29053004 sim45 G A . . AF=0.11;MS=SBS5
6 45311496 sim45 T C . . AF=0.22;MS=SBS5
6 81727793 sim45 C T . . AF=0.31;MS=SBS5
6 125764723 sim45 G T . . AF=0.12;MS=SBS1
7 2080944 sim45 G T . . AF=0.12;MS=SBS5
7 31218004 sim45 C T . . AF=0.15;MS=SBS5
7 36714145 sim45 T C . . AF=0.32;MS=SBS1
7 38382859 sim45 A T . . AF=0.31;MS=SBS1
7 55593176 sim45 C T . . AF=0.24;MS=SBS1
7 57698941 sim45 G A . . AF=0.11;MS=SBS5
7 88796911 sim45 G A . . AF=0.16;MS=SBS1
7 97331564 sim45 G T . . AF=0.41;MS=SBS5
7 113779035 sim45 G A . . AF=0.16;MS=SBS5
7 148950058 sim45 T A . . AF=0.49;MS=SBS5
8 5941613 sim45 G T . . AF=0.42;MS=SBS5
8 6367375 sim45 C T . . AF=0.07;MS=SBS1
8 14447364 sim45 C T . . AF=0.13;MS=SBS5
8 16646375 sim45 A G . . AF=0.4;MS=SBS5
8 34484005 sim45 G A . . AF=0.09;MS=SBS1
8 38274849 sim45 G T . . AF=0.13;MS=driver_FGFR1_Coding
8 48095823 sim45 G A . . AF=0.1;MS=SBS1
8 70984946 sim45 T G . . AF=0.03;MS=SBS1
8 79651858 sim45 C T . . AF=0.11;MS=SBS5
8 87596598 sim45 C A . . AF=0.37;MS=SBS5
8 89311133 sim45 G A . . AF=0.11;MS=SBS5
8 96927780 sim45 C T . . AF=0.18;MS=SBS5
8 127336194 sim45 C T . . AF=0.17;MS=SBS1
8 133108281 sim45 A C . . AF=0.07;MS=SBS5
8 139391084 sim45 T C . . AF=0.06;MS=SBS5
9 8670822 sim45 G A . . AF=0.18;MS=SBS5
9 12180341 sim45 C T . . AF=0.23;MS=SBS1
9 32473519 sim45 G A . . AF=0.18;MS=SBS1
9 33230394 sim45 A ATTTCG . . AF=0.18;MS=INS
9 77359546 sim45 G A . . AF=0.45;MS=SBS1
9 83682605 sim45 A T . . AF=0.37;MS=SBS5
9 84878195 sim45 G A . . AF=0.47;MS=SBS1
9 117174558 sim45 C T . . AF=0.1;MS=SBS1
9 123592471 sim45 T TT . . AF=0.23;MS=INS
9 140572022 sim45 C T . . AF=0.09;MS=SBS1
10 1097100 sim45 A G . . AF=0.15;MS=SBS5
10 4186994 sim45 C A . . AF=0.51;MS=SBS5
10 85413545 sim45 G T . . AF=0.31;MS=SBS5
10 109797801 sim45 A T . . AF=0.2;MS=SBS1
10 113281268 sim45 G T . . AF=0.31;MS=SBS5
10 129360909 sim45 C A . . AF=0.14;MS=SBS5
10 131491445 sim45 C T . . AF=0.31;MS=SBS1
11 9377053 sim45 A G . . AF=0.12;MS=SBS5
11 47261203 sim45 T C . . AF=0.22;MS=SBS5
11 80192269 sim45 G C . . AF=0.17;MS=SBS5
11 100611347 sim45 T C . . AF=0.2;MS=SBS5
12 24564420 sim45 T A . . AF=0.16;MS=SBS5
12 39602932 sim45 A G . . AF=0.35;MS=SBS5
12 64432792 sim45 C G . . AF=0.14;MS=SBS5
12 83930459 sim45 G A . . AF=0.3;MS=SBS5
12 84577214 sim45 A G . . AF=0.32;MS=SBS5
13 88082405 sim45 G A . . AF=0.42;MS=SBS1
13 91168451 sim45 A G . . AF=0.5;MS=SBS5
14 28664646 sim45 G C . . AF=0.09;MS=SBS5
14 40048644 sim45 T C . . AF=0.24;MS=SBS5
14 85467918 sim45 A T . . AF=0.15;MS=SBS5
16 54862426 sim45 G A . . AF=0.08;MS=SBS1
16 57003552 sim45 A T . . AF=0.3;MS=SBS5
17 74237181 sim45 G A . . AF=0.05;MS=SBS1
18 68295887 sim45 C T . . AF=0.18;MS=SBS1
18 77593285 sim45 G T . . AF=0.12;MS=SBS5
19 21135636 sim45 G A . . AF=0.08;MS=SBS1
19 21317444 sim45 C A . . AF=0.47;MS=SBS1
19 53012743 sim45 G A . . AF=0.45;MS=SBS5
19 53813221 sim45 C T . . AF=0.14;MS=SBS1
19 54405497 sim45 G A . . AF=0.14;MS=SBS1
19 58102882 sim45 G A . . AF=0.35;MS=SBS5
20 49518240 sim45 C G . . AF=0.28;MS=SBS5
21 23898709 sim45 T C . . AF=0.19;MS=SBS1
21 40776701 sim45 T A . . AF=0.22;MS=SBS5
22 35344776 sim45 G A . . AF=0.33;MS=SBS1
X 751529 sim45 G A . . AF=0.38;MS=SBS5
X 4709630 sim45 C T . . AF=0.08;MS=SBS1
X 20477679 sim45 G T . . AF=0.17;MS=SBS5
X 24298659 sim45 C T . . AF=0.13;MS=SBS1
X 38311716 sim45 C T . . AF=0.08;MS=SBS5
X 57734666 sim45 C T . . AF=0.11;MS=SBS5
X 66874606 sim45 C T . . AF=0.44;MS=SBS5
X 82189960 sim45 T A . . AF=0.42;MS=SBS1
X 87656210 sim45 T TG . . AF=0.08;MS=INS
X 93329504 sim45 G T . . AF=0.15;MS=SBS5
X 93995300 sim45 C T . . AF=0.13;MS=SBS1
X 96444589 sim45 T C . . AF=0.08;MS=SBS5
X 98773000 sim45 A G . . AF=0.37;MS=SBS5
X 99806881 sim45 G A . . AF=0.38;MS=SBS1
X 104139149 sim45 A G . . AF=0.29;MS=SBS5
X 104838453 sim45 G C . . AF=0.45;MS=SBS5
X 108030085 sim45 C T . . AF=0.12;MS=SBS1
X 133195602 sim45 T G . . AF=0.05;MS=SBS5
X 141216524 sim45 A G . . AF=0.33;MS=SBS5
X 152965456 sim45 T C . . AF=0.14;MS=SBS5