Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 6019910 sim48 CC C . . AF=0.14;MS=DEL
1 36770077 sim48 A G . . AF=0.28;MS=SBS5
1 48133836 sim48 C A . . AF=0.28;MS=SBS5
1 53177903 sim48 G A . . AF=0.45;MS=SBS1
1 56369604 sim48 C A . . AF=0.16;MS=SBS5
1 78003726 sim48 G A . . AF=0.26;MS=SBS1
1 79613518 sim48 G A . . AF=0.26;MS=SBS1
1 81058609 sim48 G C . . AF=0.21;MS=SBS5
1 82879497 sim48 T G . . AF=0.47;MS=SBS5
1 85961874 sim48 T G . . AF=0.33;MS=SBS5
1 101136428 sim48 G A . . AF=0.11;MS=SBS5
1 105947266 sim48 T C . . AF=0.09;MS=SBS5
1 145886909 sim48 G C . . AF=0.11;MS=SBS5
1 152811444 sim48 C T . . AF=0.26;MS=SBS1
1 167075805 sim48 T C . . AF=0.12;MS=SBS5
1 174374868 sim48 C G . . AF=0.14;MS=SBS5
1 174737477 sim48 A G . . AF=0.27;MS=SBS5
1 196151568 sim48 T A . . AF=0.27;MS=SBS5
1 198059719 sim48 ATA A . . AF=0.53;MS=DEL
1 200305148 sim48 G A . . AF=0.09;MS=SBS1
1 206866255 sim48 G T . . AF=0.13;MS=SBS5
1 216521155 sim48 A T . . AF=0.07;MS=SBS5
2 26701152 sim48 C A . . AF=0.14;MS=SBS5
2 35191890 sim48 A T . . AF=0.08;MS=SBS5
2 104784742 sim48 C G . . AF=0.42;MS=SBS5
2 105173595 sim48 C A . . AF=0.14;MS=SBS5
2 145993187 sim48 T C . . AF=0.15;MS=SBS5
2 151228711 sim48 T G . . AF=0.42;MS=SBS5
2 180885225 sim48 A G . . AF=0.08;MS=SBS5
2 189183267 sim48 C T . . AF=0.07;MS=SBS5
2 196025808 sim48 C A . . AF=0.14;MS=SBS5
2 222591457 sim48 T G . . AF=0.31;MS=SBS5
2 229927882 sim48 G A . . AF=0.14;MS=SBS5
3 3660983 sim48 C A . . AF=0.11;MS=SBS5
3 32999388 sim48 C T . . AF=0.06;MS=SBS1
3 46626185 sim48 C T . . AF=0.11;MS=SBS1
3 70500148 sim48 G A . . AF=0.49;MS=SBS5
3 82990969 sim48 A G . . AF=0.08;MS=SBS5
3 95390517 sim48 T G . . AF=0.08;MS=SBS5
3 95494474 sim48 G T . . AF=0.18;MS=SBS5
3 153280037 sim48 A T . . AF=0.28;MS=SBS5
3 164143030 sim48 C A . . AF=0.68;MS=SBS5
3 191301679 sim48 G C . . AF=0.15;MS=SBS5
4 15107575 sim48 C A . . AF=0.11;MS=SBS5
4 15659559 sim48 A G . . AF=0.11;MS=SBS5
4 64743442 sim48 G T . . AF=0.11;MS=SBS5
4 68474342 sim48 A AG . . AF=0.05;MS=INS
4 72788738 sim48 C G . . AF=0.12;MS=SBS5
4 94254113 sim48 C T . . AF=0.07;MS=SBS5
4 113093002 sim48 G T . . AF=0.17;MS=SBS5
4 121556010 sim48 G A . . AF=0.06;MS=SBS5
4 133272496 sim48 C A . . AF=0.12;MS=SBS5
4 134953402 sim48 G C . . AF=0.12;MS=SBS5
4 136747056 sim48 T A . . AF=0.11;MS=SBS5
4 137426420 sim48 C T . . AF=0.29;MS=SBS5
4 156035927 sim48 T A . . AF=0.15;MS=SBS5
4 158070258 sim48 T C . . AF=0.19;MS=SBS5
4 158465478 sim48 C T . . AF=0.01;MS=SBS5
4 161758501 sim48 G T . . AF=0.23;MS=SBS5
4 161998201 sim48 T C . . AF=0.16;MS=SBS5
4 168473612 sim48 A G . . AF=0.14;MS=SBS5
4 175795912 sim48 T C . . AF=0.2;MS=SBS5
4 178006335 sim48 C T . . AF=0.46;MS=SBS5
5 18562156 sim48 A T . . AF=0.2;MS=SBS5
5 19902757 sim48 A G . . AF=0.22;MS=SBS5
5 20754934 sim48 G A . . AF=0.25;MS=SBS5
5 24474642 sim48 G T . . AF=0.12;MS=SBS5
5 45020030 sim48 A G . . AF=0.18;MS=SBS5
5 50870277 sim48 A G . . AF=0.22;MS=SBS5
5 92897152 sim48 G A . . AF=0.12;MS=SBS5
5 106496437 sim48 A T . . AF=0.1;MS=SBS5
5 111051985 sim48 T C . . AF=0.31;MS=SBS5
5 122979519 sim48 A G . . AF=0.1;MS=SBS5
5 141197088 sim48 A T . . AF=0.25;MS=SBS5
5 148983927 sim48 C T . . AF=0.19;MS=SBS1
5 163982020 sim48 G C . . AF=0.12;MS=SBS5
5 178773514 sim48 T C . . AF=0.31;MS=SBS5
6 23561864 sim48 G A . . AF=0.26;MS=SBS5
6 30532327 sim48 A T . . AF=0.15;MS=SBS5
6 106630985 sim48 G C . . AF=0.09;MS=SBS5
6 112866390 sim48 C A . . AF=0.16;MS=SBS5
6 114841868 sim48 T C . . AF=0.25;MS=SBS5
6 125221443 sim48 T G . . AF=0.08;MS=SBS5
6 128341449 sim48 C T . . AF=0.08;MS=SBS5
6 148941761 sim48 A G . . AF=0.22;MS=SBS5
6 154040967 sim48 G C . . AF=0.32;MS=SBS5
7 4008099 sim48 A G . . AF=0.08;MS=SBS5
7 15705351 sim48 C A . . AF=0.23;MS=SBS5
7 57939981 sim48 C T . . AF=0.12;MS=SBS5
7 81698159 sim48 C G . . AF=0.08;MS=SBS5
7 84255127 sim48 T A . . AF=0.14;MS=SBS5
7 116386929 sim48 T C . . AF=0.22;MS=SBS5
7 140025351 sim48 T C . . AF=0.1;MS=SBS5
7 140450920 sim48 T G . . AF=0.16;MS=driver_BRAF_Intron
7 150916220 sim48 G A . . AF=0.19;MS=SBS1
8 24998001 sim48 C A . . AF=0.09;MS=SBS5
8 38226413 sim48 C T . . AF=0.3;MS=SBS1
8 39317714 sim48 C T . . AF=0.27;MS=SBS5
8 55917701 sim48 C G . . AF=0.08;MS=SBS5
8 79319833 sim48 G A . . AF=0.34;MS=SBS5
8 103292732 sim48 T C . . AF=0.35;MS=SBS5
8 110771297 sim48 C A . . AF=0.28;MS=SBS5
9 1529486 sim48 G A . . AF=0.08;MS=SBS1
9 9011055 sim48 A G . . AF=0.16;MS=SBS5
9 24841094 sim48 C T . . AF=0.38;MS=SBS5
9 106418976 sim48 A C . . AF=0.1;MS=SBS1
9 117242457 sim48 G A . . AF=0.15;MS=SBS1
9 135425659 sim48 T C . . AF=0.3;MS=SBS5
10 1008156 sim48 A G . . AF=0.29;MS=SBS5
10 35449914 sim48 G A . . AF=0.68;MS=SBS1
10 36868080 sim48 T A . . AF=0.13;MS=SBS5
10 70033360 sim48 G A . . AF=0.3;MS=SBS5
10 72346851 sim48 G A . . AF=0.41;MS=SBS5
10 72445827 sim48 G A . . AF=0.15;MS=SBS5
10 119927223 sim48 C A . . AF=0.03;MS=SBS5
11 49061363 sim48 C T . . AF=0.13;MS=SBS5
11 50492563 sim48 A T . . AF=0.35;MS=SBS5
11 58080782 sim48 G C . . AF=0.01;MS=SBS5
11 60942114 sim48 C T . . AF=0.3;MS=SBS1
11 66704762 sim48 T G . . AF=0.11;MS=SBS5
11 77467896 sim48 G C . . AF=0.3;MS=SBS5
11 100904174 sim48 A G . . AF=0.22;MS=SBS5
11 114760800 sim48 T C . . AF=0.5;MS=SBS5
11 122868699 sim48 G A . . AF=0.08;MS=SBS1
12 11258150 sim48 G A . . AF=0.23;MS=SBS1
12 40004907 sim48 G C . . AF=0.22;MS=SBS5
12 44093849 sim48 T C . . AF=0.13;MS=SBS5
12 62552308 sim48 G T . . AF=0.22;MS=SBS5
12 73003771 sim48 T A . . AF=0.21;MS=SBS5
12 82801468 sim48 C T . . AF=0.14;MS=SBS1
12 87620627 sim48 G T . . AF=0.15;MS=SBS5
12 104088147 sim48 G T . . AF=0.33;MS=SBS5
12 114381637 sim48 G A . . AF=0.3;MS=SBS5
13 23926102 sim48 A T . . AF=0.22;MS=SBS5
13 30279090 sim48 A G . . AF=0.35;MS=SBS5
13 31408154 sim48 G C . . AF=0.68;MS=SBS5
13 51779739 sim48 C A . . AF=0.11;MS=SBS5
13 68140487 sim48 A C . . AF=0.25;MS=SBS5
13 79134917 sim48 A T . . AF=0.14;MS=SBS5
13 83260634 sim48 G A . . AF=0.29;MS=SBS5
13 83684539 sim48 A C . . AF=0.12;MS=SBS5
13 88789220 sim48 G A . . AF=0.31;MS=SBS5
14 49944965 sim48 A T . . AF=0.39;MS=SBS5
14 52378636 sim48 G T . . AF=0.42;MS=SBS5
14 81162870 sim48 G T . . AF=0.2;MS=SBS5
15 64138978 sim48 A T . . AF=0.19;MS=SBS5
16 4277000 sim48 G A . . AF=0.08;MS=SBS5
16 19537525 sim48 G T . . AF=0.3;MS=SBS5
16 35238456 sim48 C G . . AF=0.21;MS=SBS5
16 54666923 sim48 G A . . AF=0.15;MS=SBS5
16 60651739 sim48 C T . . AF=0.22;MS=SBS5
16 86174931 sim48 G A . . AF=0.15;MS=SBS5
17 29216403 sim48 G T . . AF=0.26;MS=SBS5
17 36829940 sim48 C T . . AF=0.19;MS=SBS1
17 73320014 sim48 C T . . AF=0.25;MS=SBS1
17 75107709 sim48 A T . . AF=0.11;MS=SBS5
18 973125 sim48 G A . . AF=0.11;MS=SBS5
18 33117438 sim48 A G . . AF=0.2;MS=SBS5
18 42097364 sim48 G A . . AF=0.49;MS=SBS5
18 66204530 sim48 T C . . AF=0.11;MS=SBS1
18 71223135 sim48 G C . . AF=0.37;MS=SBS5
18 73964432 sim48 G A . . AF=0.11;MS=SBS1
19 3765886 sim48 A G . . AF=0.22;MS=SBS5
19 5340874 sim48 G A . . AF=0.45;MS=SBS1
19 34559960 sim48 C T . . AF=0.19;MS=SBS5
19 53430728 sim48 C A . . AF=0.21;MS=SBS5
19 53463420 sim48 C T . . AF=0.18;MS=SBS1
20 1841477 sim48 A G . . AF=0.15;MS=SBS5
20 55206334 sim48 G A . . AF=0.37;MS=SBS5
21 20689424 sim48 G C . . AF=0.07;MS=SBS5
21 35120203 sim48 G A . . AF=0.28;MS=SBS5
21 42467819 sim48 C G . . AF=0.1;MS=SBS5
22 30286649 sim48 T C . . AF=0.12;MS=SBS5
X 1259190 sim48 A G . . AF=0.05;MS=SBS5
X 1750009 sim48 G A . . AF=0.09;MS=SBS1
X 4169009 sim48 C T . . AF=0.36;MS=SBS5
X 12264645 sim48 G A . . AF=0.13;MS=SBS5
X 19891681 sim48 T C . . AF=0.15;MS=SBS5
X 36581455 sim48 A G . . AF=0.08;MS=SBS5
X 48153024 sim48 T C . . AF=0.0;MS=SBS5
X 74460429 sim48 G A . . AF=0.4;MS=SBS5
X 81223536 sim48 T A . . AF=0.08;MS=SBS5
X 132643142 sim48 C T . . AF=0.28;MS=SBS5
X 138898531 sim48 G T . . AF=0.36;MS=SBS5
X 146807791 sim48 T C . . AF=0.53;MS=SBS5
X 150699520 sim48 G T . . AF=0.32;MS=SBS5
Y 9574109 sim48 C T . . AF=0.14;MS=SBS5
Y 23572290 sim48 C A . . AF=0.21;MS=SBS5