Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 24576242 sim51 G A . . AF=0.04;MS=SBS5
1 85054838 sim51 G A . . AF=0.39;MS=SBS1
1 94089209 sim51 T C . . AF=0.09;MS=SBS5
1 166818274 sim51 G A . . AF=0.09;MS=SBS1
2 6263165 sim51 T A . . AF=0.16;MS=SBS5
2 17125356 sim51 G A . . AF=0.13;MS=SBS1
2 38812289 sim51 C T . . AF=0.23;MS=SBS5
2 46717599 sim51 C T . . AF=0.1;MS=SBS1
2 75647667 sim51 G A . . AF=0.31;MS=SBS1
2 85271862 sim51 G A . . AF=0.13;MS=SBS1
2 136961433 sim51 C T . . AF=0.58;MS=SBS5
2 158092123 sim51 C T . . AF=0.08;MS=SBS1
2 179462664 sim51 G T . . AF=0.06;MS=SBS5
2 195849764 sim51 C T . . AF=0.22;MS=SBS1
2 210233667 sim51 TT T . . AF=0.08;MS=DEL
2 211542798 sim51 A T . . AF=0.12;MS=SBS5
2 221720005 sim51 G A . . AF=0.09;MS=SBS5
2 240353832 sim51 C T . . AF=0.28;MS=SBS1
3 110125093 sim51 G A . . AF=0.29;MS=SBS5
3 131393645 sim51 A G . . AF=0.09;MS=SBS5
3 151305152 sim51 T C . . AF=0.44;MS=SBS5
3 162126139 sim51 G A . . AF=0.35;MS=SBS1
3 164753473 sim51 A G . . AF=0.11;MS=SBS5
3 166806979 sim51 C T . . AF=0.25;MS=SBS1
3 174744923 sim51 C T . . AF=0.15;MS=SBS1
4 20065458 sim51 A C . . AF=0.02;MS=SBS5
4 28463059 sim51 T C . . AF=0.25;MS=SBS1
4 31562611 sim51 G T . . AF=0.31;MS=SBS5
4 80764732 sim51 G T . . AF=0.27;MS=SBS5
4 97329585 sim51 A G . . AF=0.08;MS=SBS5
4 161973795 sim51 T G . . AF=0.4;MS=SBS5
4 180377838 sim51 C A . . AF=0.21;MS=SBS5
5 12485447 sim51 C T . . AF=0.31;MS=SBS5
5 45245624 sim51 A T . . AF=0.11;MS=SBS5
5 45874236 sim51 A C . . AF=0.19;MS=SBS5
5 66948429 sim51 G A . . AF=0.2;MS=SBS5
5 99623847 sim51 T A . . AF=0.2;MS=SBS5
5 106613767 sim51 G A . . AF=0.16;MS=SBS1
5 110601960 sim51 G A . . AF=0.23;MS=SBS1
5 116450114 sim51 C G . . AF=0.13;MS=SBS5
5 120661372 sim51 C T . . AF=0.27;MS=SBS5
6 26028537 sim51 G A . . AF=0.15;MS=SBS1
6 38495626 sim51 T C . . AF=0.29;MS=SBS5
6 42886152 sim51 C T . . AF=0.28;MS=SBS1
6 47460203 sim51 G A . . AF=0.3;MS=SBS1
6 47978103 sim51 G A . . AF=0.11;MS=SBS1
6 96061927 sim51 G A . . AF=0.13;MS=SBS1
6 123393110 sim51 C T . . AF=0.12;MS=SBS1
6 145729445 sim51 C G . . AF=0.34;MS=SBS5
6 149619023 sim51 T C . . AF=0.61;MS=SBS5
7 1925359 sim51 G A . . AF=0.3;MS=SBS1
7 24466208 sim51 G A . . AF=0.28;MS=SBS1
7 57763712 sim51 T C . . AF=0.85;MS=SBS5
7 101709391 sim51 C T . . AF=0.23;MS=SBS1
7 113170041 sim51 G A . . AF=0.19;MS=SBS5
7 129757656 sim51 T G . . AF=0.2;MS=SBS5
7 140450920 sim51 T G . . AF=0.44;MS=driver_BRAF_Intron
7 144337852 sim51 A C . . AF=0.18;MS=SBS5
8 13043878 sim51 C A . . AF=0.21;MS=SBS5
8 14291478 sim51 C T . . AF=0.19;MS=SBS1
8 16390871 sim51 C T . . AF=0.19;MS=SBS1
8 18591570 sim51 T A . . AF=0.22;MS=SBS5
8 24132364 sim51 G T . . AF=0.09;MS=SBS1
8 29842549 sim51 C T . . AF=0.23;MS=SBS1
8 41078779 sim51 A T . . AF=0.17;MS=SBS5
8 41301463 sim51 A C . . AF=0.42;MS=SBS5
8 52038592 sim51 C T . . AF=0.46;MS=SBS5
8 54894358 sim51 G A . . AF=0.11;MS=SBS1
8 78428163 sim51 G C . . AF=0.18;MS=SBS5
8 126840547 sim51 C G . . AF=0.27;MS=SBS5
8 129100325 sim51 C CAGGAG . . AF=0.08;MS=INS
8 133276274 sim51 G T . . AF=0.21;MS=SBS5
8 141271167 sim51 G A . . AF=0.4;MS=SBS1
8 141829112 sim51 G A . . AF=0.13;MS=SBS1
9 33065891 sim51 G A . . AF=0.15;MS=SBS5
9 123770973 sim51 C T . . AF=0.32;MS=SBS1
9 137846273 sim51 G A . . AF=0.15;MS=SBS5
10 8869255 sim51 C T . . AF=0.85;MS=SBS1
10 11288237 sim51 C T . . AF=0.2;MS=SBS1
10 83125397 sim51 G T . . AF=0.44;MS=SBS5
10 129427222 sim51 C G . . AF=0.11;MS=SBS5
11 35725440 sim51 G A . . AF=0.34;MS=SBS1
11 36234123 sim51 T C . . AF=0.59;MS=SBS5
11 49287190 sim51 A G . . AF=0.16;MS=SBS1
11 69996987 sim51 T C . . AF=0.1;MS=SBS5
11 92680157 sim51 G A . . AF=0.27;MS=SBS5
11 97024241 sim51 A T . . AF=0.07;MS=SBS5
11 106953357 sim51 G A . . AF=0.38;MS=SBS1
12 19156265 sim51 G A . . AF=0.15;MS=SBS5
12 27691704 sim51 C T . . AF=0.24;MS=SBS5
12 87311549 sim51 C T . . AF=0.16;MS=SBS1
12 119271022 sim51 C T . . AF=0.39;MS=SBS1
12 120402374 sim51 C A . . AF=0.16;MS=SBS5
13 26835926 sim51 G C . . AF=0.1;MS=SBS5
13 63650606 sim51 G A . . AF=0.7;MS=SBS1
13 80186850 sim51 T C . . AF=0.32;MS=SBS1
13 82536618 sim51 C A . . AF=0.12;MS=SBS5
14 45404818 sim51 G A . . AF=0.28;MS=SBS1
14 50288137 sim51 C A . . AF=0.44;MS=SBS5
15 64252421 sim51 G A . . AF=0.3;MS=SBS1
15 99032106 sim51 A G . . AF=0.33;MS=SBS5
16 15929087 sim51 G T . . AF=0.14;MS=SBS5
17 42193273 sim51 C T . . AF=0.28;MS=SBS1
18 846800 sim51 G A . . AF=0.12;MS=SBS1
18 51825957 sim51 A G . . AF=0.21;MS=SBS5
18 60854084 sim51 T C . . AF=0.16;MS=SBS5
18 70437059 sim51 A C . . AF=0.17;MS=SBS5
19 47802209 sim51 G A . . AF=0.25;MS=SBS5
19 53464741 sim51 C T . . AF=0.13;MS=SBS5
20 23323942 sim51 C A . . AF=0.38;MS=SBS5
21 20976409 sim51 A G . . AF=0.27;MS=SBS5
21 22544413 sim51 C T . . AF=0.3;MS=SBS1
21 34196516 sim51 A G . . AF=0.13;MS=SBS5
21 42915980 sim51 G A . . AF=0.27;MS=SBS1
21 46761240 sim51 C T . . AF=0.29;MS=SBS1
X 13231660 sim51 C A . . AF=0.1;MS=SBS5
X 37286585 sim51 G A . . AF=0.1;MS=SBS1
X 42547648 sim51 C A . . AF=0.25;MS=SBS1
X 69303651 sim51 C T . . AF=0.2;MS=SBS1
X 77339162 sim51 C T . . AF=0.24;MS=SBS1
X 85616534 sim51 A G . . AF=0.37;MS=SBS5
X 91201070 sim51 G A . . AF=0.1;MS=SBS1
X 113234057 sim51 C A . . AF=0.1;MS=SBS5
X 115502627 sim51 T C . . AF=0.21;MS=SBS5
X 130210817 sim51 C T . . AF=0.43;MS=SBS5
X 142426821 sim51 A T . . AF=0.06;MS=SBS1
X 150923051 sim51 C T . . AF=0.3;MS=SBS1
Y 15746257 sim51 C T . . AF=0.29;MS=SBS1