Ander
Uploading new CNA-driver VCFs
f6f8f59
##fileformat=VCFv4.2
##fileDate=20241012
##source=OncoGAN-v0.1
##reference=hg19
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency">
##INFO=<ID=MS,Number=A,Type=String,Description="Mutation type or mutational signature assigned to each mutation. Available options are: SBS (single base substitution signature), DNP (dinucleotide polymorphism), TNP (trinucleotide polymorphism), DEL (deletion), INS (insertion), driver* (driver mutation sampled from real donors)">
#CHROM POS ID REF ALT QUAL FILTER INFO
1 34122820 sim52 TT T . . AF=0.17;MS=DEL
1 93175904 sim52 C T . . AF=0.38;MS=SBS1
1 94859345 sim52 A G . . AF=0.42;MS=SBS5
1 95337522 sim52 G A . . AF=0.1;MS=SBS1
1 105854670 sim52 T C . . AF=0.31;MS=SBS5
1 114197612 sim52 T C . . AF=0.28;MS=SBS5
1 119858911 sim52 G A . . AF=0.2;MS=SBS5
1 186144261 sim52 T C . . AF=0.26;MS=SBS5
1 190487902 sim52 C T . . AF=0.14;MS=SBS5
1 221651826 sim52 C G . . AF=0.24;MS=SBS5
2 42244492 sim52 C T . . AF=0.07;MS=SBS1
2 77513670 sim52 A C . . AF=0.25;MS=SBS5
2 121842445 sim52 G A . . AF=0.17;MS=SBS1
2 146207861 sim52 T C . . AF=0.25;MS=SBS5
2 158159619 sim52 G T . . AF=0.09;MS=SBS5
2 176069692 sim52 G A . . AF=0.23;MS=SBS5
2 177240426 sim52 ATAT A . . AF=0.1;MS=DEL
2 183030373 sim52 C T . . AF=0.2;MS=SBS5
2 187988975 sim52 A T . . AF=0.09;MS=SBS5
2 194458174 sim52 C T . . AF=0.1;MS=SBS1
2 198026041 sim52 C T . . AF=0.15;MS=SBS1
2 218559992 sim52 G T . . AF=0.13;MS=SBS5
3 30887116 sim52 A C . . AF=0.33;MS=SBS5
3 43090716 sim52 T G . . AF=0.36;MS=SBS5
3 63106950 sim52 A G . . AF=0.23;MS=SBS5
3 67815825 sim52 G A . . AF=0.13;MS=SBS5
3 74909649 sim52 C T . . AF=0.1;MS=SBS5
3 80439284 sim52 C T . . AF=0.24;MS=SBS5
3 95965714 sim52 T G . . AF=0.46;MS=SBS5
3 96303302 sim52 G C . . AF=0.11;MS=SBS5
3 103684863 sim52 C T . . AF=0.39;MS=SBS1
3 144456043 sim52 G C . . AF=0.12;MS=SBS5
3 149759338 sim52 G C . . AF=0.34;MS=SBS5
3 163348221 sim52 C T . . AF=0.29;MS=SBS5
3 167282912 sim52 GA G . . AF=0.31;MS=DEL
3 177069151 sim52 T A . . AF=0.01;MS=SBS5
3 178910773 sim52 A C . . AF=0.4;MS=SBS5
3 189413867 sim52 G C . . AF=0.41;MS=SBS5
3 193271259 sim52 AAG A . . AF=0.22;MS=DEL
3 193378972 sim52 T C . . AF=0.13;MS=SBS5
4 45384554 sim52 T A . . AF=0.26;MS=SBS5
4 46857258 sim52 G T . . AF=0.08;MS=SBS5
4 59532957 sim52 G C . . AF=0.11;MS=SBS5
4 94062984 sim52 A G . . AF=0.05;MS=SBS5
4 97343374 sim52 C CCATTATCAG . . AF=0.34;MS=INS
4 117543008 sim52 C T . . AF=0.31;MS=SBS1
4 128784955 sim52 T A . . AF=0.07;MS=SBS5
4 129484912 sim52 C T . . AF=0.08;MS=SBS1
4 134653516 sim52 G A . . AF=0.09;MS=SBS5
4 143197082 sim52 T C . . AF=0.32;MS=SBS5
4 162146278 sim52 A G . . AF=0.09;MS=SBS5
4 173805826 sim52 G C . . AF=0.44;MS=SBS5
5 5650433 sim52 G A . . AF=0.32;MS=SBS1
5 12873666 sim52 G A . . AF=0.2;MS=SBS1
5 28413717 sim52 G T . . AF=0.34;MS=SBS5
5 54960153 sim52 A G . . AF=0.31;MS=SBS5
5 55397116 sim52 A AA . . AF=0.33;MS=INS
5 67537280 sim52 TTA T . . AF=0.6;MS=DEL
5 67684505 sim52 A C . . AF=0.41;MS=SBS5
5 88558093 sim52 C T . . AF=0.11;MS=SBS5
5 105121351 sim52 C G . . AF=0.1;MS=SBS5
5 147340085 sim52 C T . . AF=0.09;MS=SBS1
5 151269205 sim52 G A . . AF=0.25;MS=SBS1
5 164001367 sim52 G A . . AF=0.46;MS=SBS1
6 11086571 sim52 T TA . . AF=0.09;MS=INS
6 47787010 sim52 G A . . AF=0.1;MS=SBS5
6 57490525 sim52 T C . . AF=0.1;MS=SBS1
6 66481418 sim52 TCCA T . . AF=0.07;MS=DEL
6 79028607 sim52 G A . . AF=0.12;MS=SBS5
6 121976710 sim52 G T . . AF=0.28;MS=SBS5
6 131346936 sim52 AA A . . AF=0.16;MS=DEL
6 139374488 sim52 G A . . AF=0.11;MS=SBS5
6 145458022 sim52 C T . . AF=0.12;MS=SBS5
6 146346169 sim52 G T . . AF=0.06;MS=SBS5
6 156264850 sim52 A G . . AF=0.3;MS=SBS5
6 158156413 sim52 G A . . AF=0.34;MS=SBS5
7 21891960 sim52 C T . . AF=0.18;MS=SBS1
7 38298186 sim52 A G . . AF=0.08;MS=SBS5
7 62616614 sim52 GT G . . AF=0.21;MS=DEL
7 63705369 sim52 T C . . AF=0.25;MS=SBS5
7 77707289 sim52 G A . . AF=0.33;MS=SBS1
7 85528250 sim52 A G . . AF=0.54;MS=SBS5
7 92754076 sim52 C T . . AF=0.42;MS=SBS5
7 96835455 sim52 C T . . AF=0.08;MS=SBS5
7 121674596 sim52 A G . . AF=0.31;MS=SBS5
7 126023144 sim52 G A . . AF=0.47;MS=SBS1
7 131838208 sim52 A C . . AF=0.11;MS=SBS5
7 140668106 sim52 AA A . . AF=0.17;MS=DEL
7 142772740 sim52 A T . . AF=0.32;MS=SBS5
7 154542550 sim52 G A . . AF=0.33;MS=SBS5
8 19965645 sim52 G A . . AF=0.14;MS=SBS5
8 27593976 sim52 G T . . AF=0.23;MS=SBS5
8 41825758 sim52 A G . . AF=0.22;MS=SBS5
8 52237868 sim52 A G . . AF=0.28;MS=SBS5
8 55798736 sim52 C T . . AF=0.36;MS=SBS1
8 71456358 sim52 A G . . AF=0.1;MS=SBS5
8 72550216 sim52 A T . . AF=0.04;MS=SBS5
8 93017699 sim52 C T . . AF=0.37;MS=SBS1
9 5718705 sim52 A G . . AF=0.1;MS=SBS5
9 23482006 sim52 G A . . AF=0.13;MS=SBS1
9 24422003 sim52 G A . . AF=0.31;MS=SBS1
9 26315386 sim52 C T . . AF=0.48;MS=SBS5
9 77279177 sim52 C T . . AF=0.06;MS=SBS5
9 81217346 sim52 T G . . AF=0.17;MS=SBS5
9 85013463 sim52 A G . . AF=0.13;MS=SBS5
9 105147976 sim52 G A . . AF=0.07;MS=SBS1
9 119331824 sim52 G A . . AF=0.06;MS=SBS5
9 135515376 sim52 C G . . AF=0.12;MS=SBS5
10 3465827 sim52 G GA . . AF=0.45;MS=INS
10 3990087 sim52 C T . . AF=0.22;MS=SBS1
10 16493635 sim52 C T . . AF=0.35;MS=SBS1
10 117191417 sim52 A G . . AF=0.52;MS=SBS5
10 121478448 sim52 T C . . AF=0.36;MS=SBS1
11 5026978 sim52 ATGGTAGGTTTTGTTATAAGGTAGTGTGA A . . AF=0.26;MS=DEL
11 37609467 sim52 G A . . AF=0.33;MS=SBS1
11 45074542 sim52 C T . . AF=0.32;MS=SBS1
11 55261898 sim52 C T . . AF=0.21;MS=SBS1
11 70986340 sim52 C T . . AF=0.11;MS=SBS1
11 84933481 sim52 C T . . AF=0.36;MS=SBS5
11 91197787 sim52 T G . . AF=0.07;MS=SBS5
11 100029408 sim52 C T . . AF=0.45;MS=SBS1
11 125450706 sim52 C T . . AF=0.37;MS=SBS5
11 128063432 sim52 T G . . AF=0.55;MS=SBS5
12 11700151 sim52 G A . . AF=0.6;MS=SBS1
12 21255683 sim52 C T . . AF=0.07;MS=SBS1
12 45588768 sim52 A G . . AF=0.47;MS=SBS5
12 62460157 sim52 C T . . AF=0.33;MS=SBS1
12 64269533 sim52 C T . . AF=0.07;MS=SBS5
12 83851396 sim52 C T . . AF=0.26;MS=SBS5
12 133814898 sim52 G A . . AF=0.05;MS=SBS1
13 69901719 sim52 C T . . AF=0.16;MS=SBS1
13 81081380 sim52 T A . . AF=0.15;MS=SBS5
14 28844938 sim52 G A . . AF=0.29;MS=SBS5
14 46976204 sim52 C T . . AF=0.31;MS=SBS1
14 63956712 sim52 A G . . AF=0.08;MS=SBS5
14 74443259 sim52 G A . . AF=0.11;MS=SBS5
15 26114300 sim52 C T . . AF=0.04;MS=SBS1
15 34633271 sim52 C T . . AF=0.47;MS=SBS1
15 47836767 sim52 G A . . AF=0.12;MS=SBS5
15 67684620 sim52 G A . . AF=0.31;MS=SBS1
15 68446126 sim52 T C . . AF=0.12;MS=SBS5
15 72253817 sim52 A C . . AF=0.06;MS=SBS5
15 83536783 sim52 C T . . AF=0.37;MS=SBS5
15 92686900 sim52 AA A . . AF=0.1;MS=DEL
16 5840395 sim52 G A . . AF=0.09;MS=SBS1
16 25742552 sim52 C A . . AF=0.38;MS=SBS5
16 28293983 sim52 C A . . AF=0.07;MS=SBS5
16 53517405 sim52 G A . . AF=0.39;MS=SBS1
16 84170041 sim52 T C . . AF=0.15;MS=SBS5
16 86249996 sim52 C T . . AF=0.26;MS=SBS1
17 8213211 sim52 G A . . AF=0.82;MS=SBS1
17 45232954 sim52 T C . . AF=0.1;MS=SBS5
17 58852905 sim52 T C . . AF=0.1;MS=SBS5
17 74141708 sim52 C T . . AF=0.19;MS=SBS1
18 68151552 sim52 C T . . AF=0.09;MS=SBS1
19 2244821 sim52 C T . . AF=0.1;MS=SBS1
19 15631251 sim52 TTT T . . AF=0.05;MS=DEL
19 41496455 sim52 G A . . AF=0.18;MS=SBS1
19 55053251 sim52 G T . . AF=0.08;MS=SBS5
21 20673989 sim52 A G . . AF=0.32;MS=SBS5
21 29361408 sim52 G A . . AF=0.2;MS=SBS5
X 5224347 sim52 T C . . AF=0.2;MS=SBS5
X 8415683 sim52 TT T . . AF=0.37;MS=DEL
X 71964224 sim52 A G . . AF=0.34;MS=SBS5
X 95989670 sim52 G C . . AF=0.17;MS=SBS5
X 109855153 sim52 C T . . AF=0.11;MS=SBS5
X 115979383 sim52 AATGTTCCTGAGATACTAA A . . AF=0.16;MS=DEL
X 126977469 sim52 G A . . AF=0.14;MS=SBS5
X 138926020 sim52 C A . . AF=0.12;MS=SBS5
X 144240081 sim52 T C . . AF=0.09;MS=SBS5
Y 16536070 sim52 C T . . AF=0.27;MS=SBS5
Y 18672192 sim52 G A . . AF=0.12;MS=SBS5
Y 19438309 sim52 C T . . AF=0.23;MS=SBS1