payload: {"action":"created","issue":{"url":"https://api.github.com/repos/veg/hivtrace/issues/63","repository_url":"https://api.github.com/repos/veg/hivtrace","labels_url":"https://api.github.com/repos/veg/hivtrace/issues/63/labels{/name}","comments_url":"https://api.github.com/repos/veg/hivtrace/issues/63/comments","events_url":"https://api.github.com/repos/veg/hivtrace/issues/63/events","html_url":"https://github.com/veg/hivtrace/issues/63","id":516190979,"node_id":"MDU6SXNzdWU1MTYxOTA5Nzk=","number":63,"title":"HIV-TRACE on UGE","user":{"login":"mdhall272","id":1931652,"node_id":"MDQ6VXNlcjE5MzE2NTI=","avatar_url":"https://avatars3.githubusercontent.com/u/1931652?v=4","gravatar_id":"","url":"https://api.github.com/users/mdhall272","html_url":"https://github.com/mdhall272","followers_url":"https://api.github.com/users/mdhall272/followers","following_url":"https://api.github.com/users/mdhall272/following{/other_user}","gists_url":"https://api.github.com/users/mdhall272/gists{/gist_id}","starred_url":"https://api.github.com/users/mdhall272/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mdhall272/subscriptions","organizations_url":"https://api.github.com/users/mdhall272/orgs","repos_url":"https://api.github.com/users/mdhall272/repos","events_url":"https://api.github.com/users/mdhall272/events{/privacy}","received_events_url":"https://api.github.com/users/mdhall272/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2019-11-01T15:42:37Z","updated_at":"2019-11-01T15:51:51Z","closed_at":null,"author_association":"NONE","body":"I'm aware this is probably a difficult issue to track down if nobody has encountered it, but I wondered if anyone has - I'm trying to run HIV-TRACE in a job script on the Univa Grid Engine, but the jobs just die silently. There is nothing to standard output or standard error to determine what went wrong; those files are empty. I do not _think_ it has run out of RAM (which I've often found to be the culprit when jobs silently die) because I have given it a lot; more than I have on my laptop where it runs successfully. The only clue is hivtrace.log, which I have attached.\r\n\r\nAny ideas?\r\n\r\n[hivtrace.log](https://github.com/veg/hivtrace/files/3798537/hivtrace.log)\r\n"},"comment":{"url":"https://api.github.com/repos/veg/hivtrace/issues/comments/548840375","html_url":"https://github.com/veg/hivtrace/issues/63#issuecomment-548840375","issue_url":"https://api.github.com/repos/veg/hivtrace/issues/63","id":548840375,"node_id":"MDEyOklzc3VlQ29tbWVudDU0ODg0MDM3NQ==","user":{"login":"mdhall272","id":1931652,"node_id":"MDQ6VXNlcjE5MzE2NTI=","avatar_url":"https://avatars3.githubusercontent.com/u/1931652?v=4","gravatar_id":"","url":"https://api.github.com/users/mdhall272","html_url":"https://github.com/mdhall272","followers_url":"https://api.github.com/users/mdhall272/followers","following_url":"https://api.github.com/users/mdhall272/following{/other_user}","gists_url":"https://api.github.com/users/mdhall272/gists{/gist_id}","starred_url":"https://api.github.com/users/mdhall272/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mdhall272/subscriptions","organizations_url":"https://api.github.com/users/mdhall272/orgs","repos_url":"https://api.github.com/users/mdhall272/repos","events_url":"https://api.github.com/users/mdhall272/events{/privacy}","received_events_url":"https://api.github.com/users/mdhall272/received_events","type":"User","site_admin":false},"created_at":"2019-11-01T15:51:51Z","updated_at":"2019-11-01T15:51:51Z","author_association":"NONE","body":"No - it happens regardless. I've never got it to work as a cluster job. The script does work on a login node."}}
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