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step gets stuck in PBMC 4k and 8k runs.\n\nPlease note that these runs have been run with the nb-add-umitools branch\n\nExample provided by these two runs:\n\ncf85223a-a253-4290-9944-623a7d021c8a \n32e79a36-e687-453d-952a-361be6c1605b\n\nAC:\n- [ ] Identify issue\n- [ ] Write up summary\n- [ ] Make a plan to fix with Matrix Service\n- [ ] Make new tickets to update spec and code to address bug"},"comment":{"url":"https://api.github.com/repos/HumanCellAtlas/secondary-analysis/issues/comments/465694551","html_url":"https://github.com/HumanCellAtlas/secondary-analysis/issues/543#issuecomment-465694551","issue_url":"https://api.github.com/repos/HumanCellAtlas/secondary-analysis/issues/543","id":465694551,"node_id":"MDEyOklzc3VlQ29tbWVudDQ2NTY5NDU1MQ==","user":{"login":"mckinsel","id":145417,"node_id":"MDQ6VXNlcjE0NTQxNw==","avatar_url":"https://avatars3.githubusercontent.com/u/145417?v=4","gravatar_id":"","url":"https://api.github.com/users/mckinsel","html_url":"https://github.com/mckinsel","followers_url":"https://api.github.com/users/mckinsel/followers","following_url":"https://api.github.com/users/mckinsel/following{/other_user}","gists_url":"https://api.github.com/users/mckinsel/gists{/gist_id}","starred_url":"https://api.github.com/users/mckinsel/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mckinsel/subscriptions","organizations_url":"https://api.github.com/users/mckinsel/orgs","repos_url":"https://api.github.com/users/mckinsel/repos","events_url":"https://api.github.com/users/mckinsel/events{/privacy}","received_events_url":"https://api.github.com/users/mckinsel/received_events","type":"User","site_admin":false},"created_at":"2019-02-20T18:17:11Z","updated_at":"2019-02-20T18:17:11Z","author_association":"NONE","body":"You could even turn off the zarr step entirely if you can give me guidance on how to parse and load the raw optimus outputs."}}
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