deb101 commited on
Commit
1e76e17
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1 Parent(s): eb0b6d1

Trained L2R token ranking model on MIMIC-IV

Browse files
config.json CHANGED
@@ -1,8 +1,7 @@
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  {
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- "_attn_implementation_autoset": true,
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  "_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
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  "architectures": [
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- "MistralForCausalLM"
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  "attention_dropout": 0.0,
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  "rope_theta": 1000000.0,
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  "tie_word_embeddings": false,
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  "transformers_version": "4.49.0",
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  "use_cache": true,
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  "vocab_size": 32768
 
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  {
 
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  "_name_or_path": "mistralai/Mistral-7B-Instruct-v0.3",
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  "architectures": [
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  "attention_dropout": 0.0,
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  "bos_token_id": 1,
 
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  "sliding_window": null,
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  "tie_word_embeddings": false,
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  "transformers_version": "4.49.0",
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  "use_cache": true,
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  "vocab_size": 32768
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special_tokens_map.json CHANGED
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  "rstrip": false,
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  },
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- "pad_token": {
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- "content": "</s>",
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- "lstrip": false,
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- "normalized": false,
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- "rstrip": false,
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- "single_word": false
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- },
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  "unk_token": {
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  "content": "<unk>",
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  "lstrip": false,
 
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training_l2r_log_2025-06-11_15-29-36.log ADDED
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+ 2025-06-11 15:29:36,035 - INFO - 📝 Logging initialized. Log file created at: ../tmp/logs/training_l2r_log_2025-06-11_15-29-36.log - [learning2rank.py:287:setup_logger]
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+ 2025-06-11 15:29:36,035 - INFO - ================================================================================ - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:29:36,036 - INFO - = 📌 INITIALIZING TRAINING ENVIRONMENT = - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:29:36,036 - INFO - ================================================================================ - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:29:36,036 - INFO - 🚀 Setting up data paths and environment variables... - [learning2rank.py:3751:main]
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+ 2025-06-11 15:29:36,036 - INFO - 🛠️ Command-line Arguments: - [learning2rank.py:303:print_args]
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+ 2025-06-11 15:29:36,036 - INFO -
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+ 🔹 output_dir: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b
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+ 🔹 source_url: XURLs.MIMIC4_DEMO
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+ 🔹 data: mimic4_icd10_full
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+ 🔹 data_l2r_fname_prefix: mimic4_icd10
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+ 🔹 logfile: training_l2r_log
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+ 🔹 base_dir: ../tmp/MIMIC4_DEMO
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+ 🔹 l2r_boot_dir: ../tmp/MIMIC4_DEMO/mimic4_l2rboot_mistral7b
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+ 🔹 hub_model_id: deb101/mistral-7b-instruct-v0.3-mimic4-adapt
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+ 🔹 model_name: mistralai/Mistral-7B-Instruct-v0.3
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+ 🔹 max_length: 512
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+ 🔹 do_fresh_training: True
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+ 🔹 load_from_checkpoint: False
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+ 🔹 task: l2r
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+ 🔹 num_train_epochs: 2
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+ 🔹 metric_for_best_model: ndcg@25
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+ 🔹 learning_rate: 0.0001
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+ 🔹 warmup_steps: 0
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+ 🔹 generate_report: False
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+ 🔹 logfile_path: ../tmp/logs/training_l2r_log_2025-06-11_15-29-36.log
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+ 🔹 source: /home/ubuntu/.xcube/data/mimic4_demo - [learning2rank.py:304:print_args]
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+ 2025-06-11 15:29:36,036 - INFO - ➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖➖ - [learning2rank.py:305:print_args]
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+ 2025-06-11 15:29:36,036 - INFO - 📁 Using L2R boot directory: ../tmp/MIMIC4_DEMO/mimic4_l2rboot_mistral7b - [learning2rank.py:3765:main]
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+ 2025-06-11 15:29:36,036 - INFO - 📂 Using output directory: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:3767:main]
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+ 2025-06-11 15:29:36,037 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:29:36,037 - INFO - + ✨ LOADING DATASETS + - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:29:36,037 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:29:36,037 - INFO - 📊 Loading main dataset and L2R dataset... - [learning2rank.py:3770:main]
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+ 2025-06-11 15:29:36,037 - INFO - 📂 Loading main data from: /home/ubuntu/.xcube/data/mimic4_demo/mimic4_icd10_full.csv - [learning2rank.py:333:get_data]
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+ 2025-06-11 15:29:44,310 - INFO - ✅ Successfully loaded main data: 122279 rows - [learning2rank.py:346:get_data]
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+ 2025-06-11 15:29:44,310 - INFO - 📂 Loading L2R data from: ../tmp/MIMIC4_DEMO/mimic4_l2rboot_mistral7b/mimic4_icd10_tok_rank_per_lbl.ft - [learning2rank.py:352:get_data]
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+ 2025-06-11 15:29:44,310 - INFO - 📂 Loading L2R tokens from: ../tmp/MIMIC4_DEMO/mimic4_l2rboot_mistral7b/mimic4_icd10_tok.ft - [learning2rank.py:355:get_data]
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+ 2025-06-11 15:29:44,310 - INFO - 📂 Loading L2R labels from: ../tmp/MIMIC4_DEMO/mimic4_l2rboot_mistral7b/mimic4_icd10_lbl.ft - [learning2rank.py:358:get_data]
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+ 2025-06-11 15:29:46,024 - INFO - ✅ Successfully loaded L2R data: 260243456 rows - [learning2rank.py:365:get_data]
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+ 2025-06-11 15:29:46,024 - INFO - ✅ Successfully loaded L2R tokens: 32768 tokens - [learning2rank.py:366:get_data]
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+ 2025-06-11 15:29:46,024 - INFO - ✅ Successfully loaded L2R labels: 7942 rows - [learning2rank.py:367:get_data]
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+ 2025-06-11 15:29:46,024 - INFO - 🔄 Total data loaded: 122279 main rows, 260243456 L2R rows - [learning2rank.py:374:get_data]
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+ 2025-06-11 15:29:46,025 - INFO - ✨ Successfully loaded both datasets: - [learning2rank.py:398:load_datasets]
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+ 2025-06-11 15:29:46,025 - INFO - - 📄 Main dataset: 122279 records - [learning2rank.py:399:load_datasets]
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+ 2025-06-11 15:29:46,025 - INFO - - 📄 L2R dataset: 260243456 records - [learning2rank.py:400:load_datasets]
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+ 2025-06-11 15:29:46,025 - INFO - - 🔤 Tokens: 32768 items - [learning2rank.py:401:load_datasets]
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+ 2025-06-11 15:29:46,025 - INFO - - 🏷️ Labels: 7942 items - [learning2rank.py:402:load_datasets]
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+ 2025-06-11 15:29:46,032 - INFO - ✅ Data loading completed successfully - [learning2rank.py:410:load_datasets]
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+ 2025-06-11 15:29:47,314 - INFO - ⏳ Starting quantization of ranks for DataFrame with 260243456 rows. Containing 32768 unique tokens & 7942 unique labels - [learning2rank.py:529:quantize_l2r_data]
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+ 2025-06-11 15:29:47,314 - INFO - 🔄 Quantizing those 32768 unique token ranks into 101 quantization levels for each label - [learning2rank.py:554:quantize_l2r_data]
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+ 2025-06-11 15:30:33,284 - INFO - ✅ Completed quantization: Produced tensor of shape torch.Size([7942, 32768, 4]) with 101 quantization levels per label - [learning2rank.py:608:quantize_l2r_data]
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+ 2025-06-11 15:30:33,309 - WARNING - Label 457: Only 1 tokens with top relevance score (need 50) - [learning2rank.py:724:test_scored_tokens]
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+ 2025-06-11 15:30:33,314 - WARNING - Label 2871: Only 1 tokens with top relevance score (need 50) - [learning2rank.py:724:test_scored_tokens]
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+ 2025-06-11 15:30:33,318 - WARNING - Label 4330: Only 1 tokens with top relevance score (need 50) - [learning2rank.py:724:test_scored_tokens]
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+ 2025-06-11 15:30:33,322 - WARNING - Label 3865: Only 1 tokens with top relevance score (need 50) - [learning2rank.py:724:test_scored_tokens]
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+ 2025-06-11 15:30:33,325 - WARNING - Label 6626: Only 1 tokens with top relevance score (need 50) - [learning2rank.py:724:test_scored_tokens]
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+ 2025-06-11 15:30:33,353 - INFO - ******************************************************************************** - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:30:33,353 - INFO - * 🌟 STARTING LEARNING TO RANK MODEL TRAINING * - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:30:33,353 - INFO - ******************************************************************************** - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:30:33,353 - INFO - 🔐 Loaded authentication token from environment - [learning2rank.py:3799:main]
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+ 2025-06-11 15:30:33,353 - INFO - 🏷️ Hub Model ID for this Learning to Rank task: deb101/mistral-7b-instruct-v0.3-mimic4-adapt-l2r - [learning2rank.py:3803:main]
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+ 2025-06-11 15:30:33,353 - INFO - -------------------------------------------------------------------------------- - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:30:33,353 - INFO - - 📋 MODEL EXISTENCE CHECK - - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:30:33,353 - INFO - -------------------------------------------------------------------------------- - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:30:33,353 - INFO - 🔍 Checking model existence locally and on Hugging Face Hub... - [learning2rank.py:430:check_model_existence]
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+ 2025-06-11 15:30:33,354 - INFO - ❌ Model not found locally at: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:437:check_model_existence]
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+ 2025-06-11 15:30:33,411 - INFO - ✅ Model exists on Hugging Face Hub with ID: deb101/mistral-7b-instruct-v0.3-mimic4-adapt-l2r - [learning2rank.py:449:check_model_existence]
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+ 2025-06-11 15:30:33,411 - INFO - 📁 Model exists either locally or on Hub - [learning2rank.py:475:check_model_existence]
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+ 2025-06-11 15:30:33,411 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:30:33,411 - INFO - + ✨ STARTING FRESH TRAINING + - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:30:33,411 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:30:33,411 - INFO - 🔄 Starting fresh training (either forced or model not found)... - [learning2rank.py:3816:main]
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+ 2025-06-11 15:30:33,681 - WARNING - Note: Environment variable`HF_TOKEN` is set and is the current active token independently from the token you've just configured. - [_login.py:415:_login]
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+ 2025-06-11 15:30:33,681 - INFO - 🔑 Successfully authenticated with Hugging Face Hub - [learning2rank.py:311:authenticate_hf]
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+ 2025-06-11 15:30:33,681 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:30:33,681 - INFO - + ✨ LOADING BASE MODEL + - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:30:33,681 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:30:33,681 - INFO - 📥 Loading pretrained model and tokenizer... - [learning2rank.py:3858:main]
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+ 2025-06-11 15:30:33,681 - INFO - 🚀 Starting model and tokenizer loading process... - [learning2rank.py:939:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:33,682 - INFO - 📊 Quantization config: BitsAndBytesConfig {
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+ "_load_in_4bit": true,
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+ "_load_in_8bit": false,
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+ "bnb_4bit_compute_dtype": "bfloat16",
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+ "bnb_4bit_quant_storage": "uint8",
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+ "bnb_4bit_quant_type": "nf4",
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+ "bnb_4bit_use_double_quant": true,
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+ "llm_int8_enable_fp32_cpu_offload": false,
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+ "llm_int8_has_fp16_weight": false,
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+ "llm_int8_skip_modules": null,
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+ "llm_int8_threshold": 6.0,
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+ "load_in_4bit": true,
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+ "load_in_8bit": false,
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+ "quant_method": "bitsandbytes"
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+ }
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+ - [learning2rank.py:948:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:33,682 - INFO - 🔤 Loading tokenizer for model: mistralai/Mistral-7B-Instruct-v0.3... - [learning2rank.py:952:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:33,981 - INFO - 📝 Setting pad token to eos token... - [learning2rank.py:956:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:33,981 - INFO - 🧠 Loading base model with quantization... - [learning2rank.py:964:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:34,497 - INFO - We will use 90% of the memory on device 0 for storing the model, and 10% for the buffer to avoid OOM. You can set `max_memory` in to a higher value to use more memory (at your own risk). - [modeling.py:991:get_balanced_memory]
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+ 2025-06-11 15:30:39,731 - INFO - 🔧 Setting up default LoRA configuration... - [learning2rank.py:987:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:39,731 - INFO - 🔍 LoRA config: r=16, alpha=32, targets={'k_proj', 'q_proj', 'o_proj', 'v_proj'}, dropout=0.05 - [learning2rank.py:1010:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:39,731 - INFO - 🧩 Applying LoRA adapters to model... - [learning2rank.py:1017:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:39,906 - INFO - 📊 trainable params: 13,631,488 || all params: 7,261,655,040 || trainable%: 0.1877 - [learning2rank.py:135:log_print_output]
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+ 2025-06-11 15:30:39,907 - INFO - ✅ Model and tokenizer successfully loaded! - [learning2rank.py:1024:load_base_model_and_tokenizer]
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+ 2025-06-11 15:30:39,907 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:30:39,907 - INFO - + ✨ DATA PREPROCESSING + - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:30:39,907 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:30:39,907 - INFO - 🔄 Loading and preprocessing training data... - [learning2rank.py:3866:main]
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+ 2025-06-11 15:30:40,975 - INFO - 🔍 Verifying uniqueness of token IDs per label in scored_tokens... - [learning2rank.py:1302:preprocess_data]
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+ 2025-06-11 15:30:41,803 - INFO - ✅ All labels have unique token IDs in scored_tokens. - [learning2rank.py:1314:preprocess_data]
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+ 2025-06-11 15:30:41,803 - INFO - 🚀 Building a 2D lookup table for efficient token-to-relevance mapping across all labels! 🚀 - [learning2rank.py:1317:preprocess_data]
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+ 2025-06-11 15:30:41,803 - INFO - 🔢 Total labels = 7942 - [learning2rank.py:1320:preprocess_data]
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+ 2025-06-11 15:30:41,803 - INFO - 🔍 Precomputing token indices and corresponding relevance_values for each label... - [learning2rank.py:1321:preprocess_data]
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+ 2025-06-11 15:30:42,036 - INFO - 📊 Lookup table dimensions: 32768 vocabulary size × 7942 labels - [learning2rank.py:1328:preprocess_data]
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+ 2025-06-11 15:30:42,036 - INFO - ⚡ This approach eliminates token comparison broadcasting and provides O(1) lookup time for relevance scores! - [learning2rank.py:1331:preprocess_data]
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+ 2025-06-11 15:30:42,036 - INFO - 🧮 Processing relevance calculations vectorized for maximum speed 🔥 - [learning2rank.py:1334:preprocess_data]
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+ 2025-06-11 15:30:42,202 - INFO - 🔍 Verifying token mappings with 10 samples... - [learning2rank.py:1367:verify_token_mappings]
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+ 2025-06-11 15:30:42,375 - INFO - ✅ Token mappings verification completed successfully! 🎉 - [learning2rank.py:1458:verify_token_mappings]
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+ 2025-06-11 15:30:42,380 - INFO - 🔄 Processing dataset with map... - [learning2rank.py:1522:preprocess_data]
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+ 2025-06-11 15:30:42,697 - INFO - ✅ Dataset built in 0h 0m 0.32s - [learning2rank.py:1545:preprocess_data]
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+ 2025-06-11 15:30:42,709 - INFO - The size of Training set: 173 🏋️ (Training Data) - [learning2rank.py:1576:preprocess_data]
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+ 2025-06-11 15:30:42,709 - INFO - The size of Evaluation set: 35 🔍 (Test Data) - [learning2rank.py:1577:preprocess_data]
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+ 2025-06-11 15:30:42,709 - INFO - 🚀 Created HuggingFace Dataset with 208 samples, 7942 labels - [learning2rank.py:1585:preprocess_data]
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+ 2025-06-11 15:30:42,710 - INFO - 🏷️ Number of unique ICD-10 codes: 7942 - [learning2rank.py:3879:main]
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+ 2025-06-11 15:30:42,710 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:30:42,710 - INFO - + ✨ MODEL INITIALIZATION + - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:30:42,710 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:30:42,710 - INFO - 🧠 Initializing custom L2R model for outputting per-token relevance scores per ICD-10 codes. - [learning2rank.py:3882:main]
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+ 2025-06-11 15:30:44,257 - INFO - 🔧 Registering LTRModel with transformers AutoModel 🚀 - [learning2rank.py:1725:define_model]
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+ 2025-06-11 15:30:44,258 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:109:log_section]
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+ 2025-06-11 15:30:44,258 - INFO - + ✨ TRAINING PREPARATION + - [learning2rank.py:110:log_section]
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+ 2025-06-11 15:30:44,258 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:113:log_section]
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+ 2025-06-11 15:30:44,258 - INFO - ⚙️ Preparing training components and optimizers... - [learning2rank.py:3889:main]
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+ 2025-06-11 15:30:44,289 - INFO - 🖥️ Device: NVIDIA GH200 480GB - [learning2rank.py:1887:log_training_configuration]
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+ 2025-06-11 15:30:44,289 - INFO - 🔋 CUDA Available: True - [learning2rank.py:1890:log_training_configuration]
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+ 2025-06-11 15:30:44,289 - INFO - 💾 CUDA Device Count: 1 - [learning2rank.py:1891:log_training_configuration]
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+ 2025-06-11 15:30:44,290 - INFO -
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+ 📋 Training Configuration 📋
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+ +----------+-----------------------------+--------------------------------------------------+
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+ | 🌟 Emoji | 🏷️ Parameter | 📊 Value |
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+ +----------+-----------------------------+--------------------------------------------------+
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+ | 📁 | Output Directory | ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b |
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+ | 🔁 | Training Epochs | 2 |
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+ | 🏋️ | Train Batch Size | 1 |
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+ | 🔍 | Eval Batch Size | 1 |
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+ | 📊 | Gradient Accumulation Steps | 4 |
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+ | 🚀 | Learning Rate | 0.0001 |
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+ | 🌅 | Warmup Steps | 0 |
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+ | 💾 | Save Strategy | epoch |
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+ | 💾 | Save Total Limit | 10 |
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+ | 📊 | Evaluation Strategy | epoch |
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+ | 🎯 | Best Model Metric | ndcg@25 |
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+ | 📝 | Logging Strategy | steps (every 10 steps) |
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+ | 🌐 | Push to Hub | True |
156
+ | 🌐 | Hub Model ID | deb101/mistral-7b-instruct-v0.3-mimic4-adapt-l2r |
157
+ | 🔢 | Steps per Epoch | 43 |
158
+ | 🔢 | Total Training Steps | 86 |
159
+ | 🔢 | Evaluation Steps | 35 |
160
+ | 📊 | Training Dataset Size | 173 samples 🏋️ |
161
+ | 📊 | Evaluation Dataset Size | 35 samples 🔍 |
162
+ +----------+-----------------------------+--------------------------------------------------+ - [learning2rank.py:1879:log_training_args]
163
+ 2025-06-11 15:30:44,290 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:109:log_section]
164
+ 2025-06-11 15:30:44,290 - INFO - + ✨ MODEL TRAINING + - [learning2rank.py:110:log_section]
165
+ 2025-06-11 15:30:44,290 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:113:log_section]
166
+ 2025-06-11 15:30:44,290 - INFO - 🏋️ Starting model training process... - [learning2rank.py:3909:main]
167
+ 2025-06-11 15:30:44,290 - INFO - 🏁 Preparing Custom Trainer 🛠️ - [learning2rank.py:3080:train_model]
168
+ 2025-06-11 15:30:44,329 - INFO - We are registering the tokenizer mistralai/Mistral-7B-Instruct-v0.3 in Custom Trainer - [learning2rank.py:2519:__init__]
169
+ 2025-06-11 15:30:44,329 - INFO - 🏋️ Commencing Model Training 💪 - [learning2rank.py:3121:train_model]
170
+ 2025-06-11 15:30:44,595 - INFO - 🚀 Starting Training... - [learning2rank.py:2269:on_train_begin]
171
+ 2025-06-11 15:31:06,023 - INFO -
172
+ 🚂 Training Metrics (Step 10) 🚂
173
+ +---------------+--------------+
174
+ | Metric | Value |
175
+ +===============+==============+
176
+ | loss | -4.73834e+16 |
177
+ +---------------+--------------+
178
+ | grad_norm | nan |
179
+ +---------------+--------------+
180
+ | learning_rate | 0.0001 |
181
+ +---------------+--------------+
182
+ | epoch | 0.231214 |
183
+ +---------------+--------------+ - [learning2rank.py:2187:on_log]
184
+ 2025-06-11 15:31:20,408 - INFO -
185
+ 🚂 Training Metrics (Step 20) 🚂
186
+ +---------------+--------------+
187
+ | Metric | Value |
188
+ +===============+==============+
189
+ | loss | -3.59497e+17 |
190
+ +---------------+--------------+
191
+ | grad_norm | nan |
192
+ +---------------+--------------+
193
+ | learning_rate | 0.0001 |
194
+ +---------------+--------------+
195
+ | epoch | 0.462428 |
196
+ +---------------+--------------+ - [learning2rank.py:2187:on_log]
197
+ 2025-06-11 15:31:34,863 - INFO -
198
+ 🚂 Training Metrics (Step 30) 🚂
199
+ +---------------+--------------+
200
+ | Metric | Value |
201
+ +===============+==============+
202
+ | loss | -6.37696e+16 |
203
+ +---------------+--------------+
204
+ | grad_norm | nan |
205
+ +---------------+--------------+
206
+ | learning_rate | 0.0001 |
207
+ +---------------+--------------+
208
+ | epoch | 0.693642 |
209
+ +---------------+--------------+ - [learning2rank.py:2187:on_log]
210
+ 2025-06-11 15:31:49,256 - INFO -
211
+ 🚂 Training Metrics (Step 40) 🚂
212
+ +---------------+--------------+
213
+ | Metric | Value |
214
+ +===============+==============+
215
+ | loss | -8.24219e+17 |
216
+ +---------------+--------------+
217
+ | grad_norm | nan |
218
+ +---------------+--------------+
219
+ | learning_rate | 0.0001 |
220
+ +---------------+--------------+
221
+ | epoch | 0.924855 |
222
+ +---------------+--------------+ - [learning2rank.py:2187:on_log]
223
+ 2025-06-11 15:31:53,966 - INFO - Removing 'token_type_ids' from eval_dataset as they are not needed. - [learning2rank.py:2635:evaluate]
224
+ 2025-06-11 15:35:08,172 - WARNING - No valid samples found for metric 'precision@25'. - [learning2rank.py:2739:evaluate]
225
+ 2025-06-11 15:35:08,172 - INFO -
226
+ 🔍 Evaluation Metrics 🔍
227
+ +-------------------+-------------+
228
+ | Metric | Value |
229
+ +===================+=============+
230
+ | eval_loss | -1.2019e+17 |
231
+ +-------------------+-------------+
232
+ | eval_ndcg | 0.955488 |
233
+ +-------------------+-------------+
234
+ | eval_ndcg@25 | 0.212566 |
235
+ +-------------------+-------------+
236
+ | eval_precision@25 | 0 |
237
+ +-------------------+-------------+ - [learning2rank.py:2206:on_evaluate]
238
+ 2025-06-11 15:35:09,356 - INFO - 💾 Model weights saved in safetensors format: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-44 - [learning2rank.py:2759:_save]
239
+ 2025-06-11 15:35:09,383 - INFO - ⚙️ Config saved in checkpoint: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-44 - [learning2rank.py:2764:_save]
240
+ 2025-06-11 15:35:09,384 - INFO - 📋 Saved files in ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-44:
241
+ +---------+-------------------+------------+
242
+ | Index | Saved File | Size |
243
+ +=========+===================+============+
244
+ | 1 | training_args.bin | 0.01 MB |
245
+ +---------+-------------------+------------+
246
+ | 2 | model.safetensors | 4122.74 MB |
247
+ +---------+-------------------+------------+
248
+ | 3 | config.json | 0.38 MB |
249
+ +---------+-------------------+------------+ - [learning2rank.py:2781:_save]
250
+ 2025-06-11 15:35:22,810 - INFO -
251
+ 🚂 Training Metrics (Step 50) 🚂
252
+ +---------------+--------------+
253
+ | Metric | Value |
254
+ +===============+==============+
255
+ | loss | -1.24339e+18 |
256
+ +---------------+--------------+
257
+ | grad_norm | nan |
258
+ +---------------+--------------+
259
+ | learning_rate | 0.0001 |
260
+ +---------------+--------------+
261
+ | epoch | 1.13873 |
262
+ +---------------+--------------+ - [learning2rank.py:2187:on_log]
263
+ 2025-06-11 15:35:37,308 - INFO -
264
+ 🚂 Training Metrics (Step 60) 🚂
265
+ +---------------+--------------+
266
+ | Metric | Value |
267
+ +===============+==============+
268
+ | loss | -8.42207e+16 |
269
+ +---------------+--------------+
270
+ | grad_norm | nan |
271
+ +---------------+--------------+
272
+ | learning_rate | 9.7e-05 |
273
+ +---------------+--------------+
274
+ | epoch | 1.36994 |
275
+ +---------------+--------------+ - [learning2rank.py:2187:on_log]
276
+ 2025-06-11 15:35:51,736 - INFO -
277
+ 🚂 Training Metrics (Step 70) 🚂
278
+ +---------------+--------------+
279
+ | Metric | Value |
280
+ +===============+==============+
281
+ | loss | -6.54621e+18 |
282
+ +---------------+--------------+
283
+ | grad_norm | 1.53209e+18 |
284
+ +---------------+--------------+
285
+ | learning_rate | 8.8e-05 |
286
+ +---------------+--------------+
287
+ | epoch | 1.60116 |
288
+ +---------------+--------------+ - [learning2rank.py:2187:on_log]
289
+ 2025-06-11 15:36:06,062 - INFO -
290
+ 🚂 Training Metrics (Step 80) 🚂
291
+ +---------------+--------------+
292
+ | Metric | Value |
293
+ +===============+==============+
294
+ | loss | -9.11572e+16 |
295
+ +---------------+--------------+
296
+ | grad_norm | nan |
297
+ +---------------+--------------+
298
+ | learning_rate | 7.8e-05 |
299
+ +---------------+--------------+
300
+ | epoch | 1.83237 |
301
+ +---------------+--------------+ - [learning2rank.py:2187:on_log]
302
+ 2025-06-11 15:36:15,873 - INFO - 💾 Model weights saved in safetensors format: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-86 - [learning2rank.py:2759:_save]
303
+ 2025-06-11 15:36:15,900 - INFO - ⚙️ Config saved in checkpoint: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-86 - [learning2rank.py:2764:_save]
304
+ 2025-06-11 15:36:15,901 - INFO - 📋 Saved files in ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-86:
305
+ +---------+-------------------+------------+
306
+ | Index | Saved File | Size |
307
+ +=========+===================+============+
308
+ | 1 | training_args.bin | 0.01 MB |
309
+ +---------+-------------------+------------+
310
+ | 2 | model.safetensors | 4122.74 MB |
311
+ +---------+-------------------+------------+
312
+ | 3 | config.json | 0.38 MB |
313
+ +---------+-------------------+------------+ - [learning2rank.py:2781:_save]
314
+ 2025-06-11 15:36:16,120 - INFO - Removing 'token_type_ids' from eval_dataset as they are not needed. - [learning2rank.py:2635:evaluate]
315
+ 2025-06-11 15:39:29,774 - INFO -
316
+ 🔍 Evaluation Metrics 🔍
317
+ +-------------------+--------------+
318
+ | Metric | Value |
319
+ +===================+==============+
320
+ | eval_loss | -2.89696e+17 |
321
+ +-------------------+--------------+
322
+ | eval_ndcg | 0.956037 |
323
+ +-------------------+--------------+
324
+ | eval_ndcg@25 | 0.620746 |
325
+ +-------------------+--------------+
326
+ | eval_precision@25 | 0.2464 |
327
+ +-------------------+--------------+ - [learning2rank.py:2206:on_evaluate]
328
+ 2025-06-11 15:39:33,224 - INFO - 💾 Model weights saved in safetensors format: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-86 - [learning2rank.py:2759:_save]
329
+ 2025-06-11 15:39:33,252 - INFO - ⚙️ Config saved in checkpoint: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-86 - [learning2rank.py:2764:_save]
330
+ 2025-06-11 15:39:33,253 - INFO - 📋 Saved files in ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-86:
331
+ +---------+--------------------+------------+
332
+ | Index | Saved File | Size |
333
+ +=========+====================+============+
334
+ | 1 | training_args.bin | 0.01 MB |
335
+ +---------+--------------------+------------+
336
+ | 2 | optimizer.pt | 352.39 MB |
337
+ +---------+--------------------+------------+
338
+ | 3 | model.safetensors | 4122.74 MB |
339
+ +---------+--------------------+------------+
340
+ | 4 | scaler.pt | 0.00 MB |
341
+ +---------+--------------------+------------+
342
+ | 5 | config.json | 0.38 MB |
343
+ +---------+--------------------+------------+
344
+ | 6 | scheduler.pt | 0.00 MB |
345
+ +---------+--------------------+------------+
346
+ | 7 | trainer_state.json | 0.00 MB |
347
+ +---------+--------------------+------------+
348
+ | 8 | rng_state.pth | 0.01 MB |
349
+ +---------+--------------------+------------+ - [learning2rank.py:2781:_save]
350
+ 2025-06-11 15:39:33,735 - INFO - 📂 Loading best model from ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-86 - [learning2rank.py:2837:_load_best_model]
351
+ 2025-06-11 15:39:33,735 - INFO - 🖥️ Model is on device: cuda:0 - [learning2rank.py:2847:_load_best_model]
352
+ 2025-06-11 15:39:33,798 - INFO - 🔑 Key order comparison:
353
+ +---------+--------------------------------------------------------------------------+-------------------------------------------------------------------------------------------+
354
+ | Index | Saved state_dict Keys | Model state_dict Keys |
355
+ +=========+==========================================================================+===========================================================================================+
356
+ | 1 | ground_model.base_model.model.lm_head.weight | label_embeddings.weight |
357
+ +---------+--------------------------------------------------------------------------+-------------------------------------------------------------------------------------------+
358
+ | 2 | ground_model.base_model.model.model.embed_tokens.weight | ground_model.base_model.model.model.embed_tokens.weight |
359
+ +---------+--------------------------------------------------------------------------+-------------------------------------------------------------------------------------------+
360
+ | 3 | ground_model.base_model.model.model.layers.0.input_layernorm.weight | ground_model.base_model.model.model.layers.0.self_attn.q_proj.base_layer.weight |
361
+ +---------+--------------------------------------------------------------------------+-------------------------------------------------------------------------------------------+
362
+ | 4 | ground_model.base_model.model.model.layers.0.mlp.down_proj.weight | ground_model.base_model.model.model.layers.0.self_attn.q_proj.base_layer.weight.absmax |
363
+ +---------+--------------------------------------------------------------------------+-------------------------------------------------------------------------------------------+
364
+ | 5 | ground_model.base_model.model.model.layers.0.mlp.down_proj.weight.absmax | ground_model.base_model.model.model.layers.0.self_attn.q_proj.base_layer.weight.quant_map |
365
+ +---------+--------------------------------------------------------------------------+-------------------------------------------------------------------------------------------+ - [learning2rank.py:2871:_load_best_model]
366
+ 2025-06-11 15:39:34,630 - INFO - ✅ Loaded best model weights from ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/checkpoint-86/model.safetensors - [learning2rank.py:2888:_load_best_model]
367
+ 2025-06-11 15:39:34,670 - INFO - ✔️ Weight for label_embeddings.weight matches between saved and loaded state_dict - [learning2rank.py:2900:_load_best_model]
368
+ 2025-06-11 15:39:34,725 - INFO - ✔️ Weight for ground_model.base_model.model.model.embed_tokens.weight matches between saved and loaded state_dict - [learning2rank.py:2900:_load_best_model]
369
+ 2025-06-11 15:39:34,740 - INFO -
370
+ 🚂 Training Metrics (Step 86) 🚂
371
+ +--------------------------+--------------+
372
+ | Metric | Value |
373
+ +==========================+==============+
374
+ | train_runtime | 530.146 |
375
+ +--------------------------+--------------+
376
+ | train_samples_per_second | 0.653 |
377
+ +--------------------------+--------------+
378
+ | train_steps_per_second | 0.162 |
379
+ +--------------------------+--------------+
380
+ | total_flos | 3.81076e+15 |
381
+ +--------------------------+--------------+
382
+ | train_loss | -1.15684e+18 |
383
+ +--------------------------+--------------+
384
+ | epoch | 1.9711 |
385
+ +--------------------------+--------------+ - [learning2rank.py:2187:on_log]
386
+ 2025-06-11 15:39:34,740 - INFO - ✨ Training Completed! ✨ - [learning2rank.py:2336:on_train_end]
387
+ 2025-06-11 15:39:34,814 - INFO - 📊 Training loss plot saved as '../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/train_loss_plot.png' - [learning2rank.py:2439:on_train_end]
388
+ 2025-06-11 15:39:34,870 - INFO - 📊 Evaluation loss plot saved as '../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/eval_loss_plot.png' - [learning2rank.py:2453:on_train_end]
389
+ 2025-06-11 15:39:34,928 - INFO - 📊 Evaluation metric plot saved as '../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/eval_ndcg@25_plot.png' - [learning2rank.py:2474:on_train_end]
390
+ 2025-06-11 15:39:34,928 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:109:log_section]
391
+ 2025-06-11 15:39:34,928 - INFO - + ✨ MODEL SAVING + - [learning2rank.py:110:log_section]
392
+ 2025-06-11 15:39:34,928 - INFO - ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ - [learning2rank.py:113:log_section]
393
+ 2025-06-11 15:39:34,928 - INFO - 💾 Saving trained model and pushing to Hugging Face Hub... - [learning2rank.py:3924:main]
394
+ 2025-06-11 15:39:34,928 - INFO - 📁 Creating/using output directory: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:3155:save_and_push]
395
+ 2025-06-11 15:39:36,118 - INFO - 💾 Model weights saved in safetensors format: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:2759:_save]
396
+ 2025-06-11 15:39:36,144 - INFO - ⚙️ Config saved in checkpoint: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:2764:_save]
397
+ 2025-06-11 15:39:36,145 - INFO - 📋 Saved files in ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b:
398
+ +---------+-----------------------+------------+
399
+ | Index | Saved File | Size |
400
+ +=========+=======================+============+
401
+ | 1 | eval_loss_plot.png | 0.03 MB |
402
+ +---------+-----------------------+------------+
403
+ | 2 | training_args.bin | 0.01 MB |
404
+ +---------+-----------------------+------------+
405
+ | 3 | model.safetensors | 4122.74 MB |
406
+ +---------+-----------------------+------------+
407
+ | 4 | eval_ndcg@25_plot.png | 0.04 MB |
408
+ +---------+-----------------------+------------+
409
+ | 5 | config.json | 0.38 MB |
410
+ +---------+-----------------------+------------+
411
+ | 6 | train_loss_plot.png | 0.03 MB |
412
+ +---------+-----------------------+------------+ - [learning2rank.py:2781:_save]
413
+ 2025-06-11 15:39:39,545 - INFO - 💾 Model weights saved in safetensors format: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:2759:_save]
414
+ 2025-06-11 15:39:39,573 - INFO - ⚙️ Config saved in checkpoint: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:2764:_save]
415
+ 2025-06-11 15:39:39,575 - INFO - 📋 Saved files in ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b:
416
+ +---------+-----------------------+------------+
417
+ | Index | Saved File | Size |
418
+ +=========+=======================+============+
419
+ | 1 | eval_loss_plot.png | 0.03 MB |
420
+ +---------+-----------------------+------------+
421
+ | 2 | training_args.bin | 0.01 MB |
422
+ +---------+-----------------------+------------+
423
+ | 3 | model.safetensors | 4122.74 MB |
424
+ +---------+-----------------------+------------+
425
+ | 4 | eval_ndcg@25_plot.png | 0.04 MB |
426
+ +---------+-----------------------+------------+
427
+ | 5 | config.json | 0.38 MB |
428
+ +---------+-----------------------+------------+
429
+ | 6 | train_loss_plot.png | 0.03 MB |
430
+ +---------+-----------------------+------------+ - [learning2rank.py:2781:_save]
431
+ 2025-06-11 15:41:03,613 - INFO - 💾 Model saved to: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:3159:save_and_push]
432
+ 2025-06-11 15:41:07,306 - INFO - 💾 Model and config explicitly saved to: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:3163:save_and_push]
433
+ 2025-06-11 15:41:07,337 - INFO - 🖌️ Tokenizer saved to: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b - [learning2rank.py:3167:save_and_push]
434
+ 2025-06-11 15:41:07,771 - INFO - 📊 Lookup table saved to: ../tmp/MIMIC4_DEMO/mimic4_l2rtrain_mistral7b/lookup_table.pt - [learning2rank.py:3172:save_and_push]