MaziyarPanahi commited on
Commit
25f4031
·
verified ·
1 Parent(s): ea80ffd

Update README.md (#1)

Browse files

- Update README.md (3315ebe6642974a705ac76c0c066b8e8156a4b6c)

Files changed (1) hide show
  1. README.md +9 -3
README.md CHANGED
@@ -1,3 +1,4 @@
 
1
  pretty_name: MultiCaRe Articles
2
  license: cc-by-4.0
3
  task_categories:
@@ -6,7 +7,8 @@ task_categories:
6
  language:
7
  - en
8
  size_categories:
9
- - 10K<n<100K
 
10
 
11
  # MultiCaRe: Open-Source Clinical Case Dataset
12
 
@@ -15,12 +17,13 @@ MultiCaRe aggregates open-access, de-identified clinical case reports from PubMe
15
  - Source and process: parse PMC OA case reports; extract metadata/abstracts; download/process figures; align captions; build a hierarchical taxonomy for image labels.
16
  - Scale: 85k+ OA articles, 160k+ images (v2.0).
17
  - Tasks: article-level retrieval/classification, summarization; joins to cases/images for multimodal tasks.
18
- - Citation: MDPI DATA paper — https://www.mdpi.com/2306-5729/10/8/123; Zenodo — https://zenodo.org/records/13936721.
19
 
20
  This repository: per-article dataset
21
  Per-article dataset with bibliographic metadata and abstracts (one file: articles.parquet).
22
 
23
  Schema
 
24
  - article_id: PMCID (primary key)
25
  - title, journal, year
26
  - doi, pmid, pmcid
@@ -29,15 +32,17 @@ Schema
29
  - abstract: article abstract
30
 
31
  Quick start
 
32
  ```python
33
  from datasets import load_dataset
34
  art = load_dataset("openmed-community/multicare-articles", split="train")
35
  row = art[0]
36
- print(row["title"])
37
  print(row["abstract"][:600])
38
  ```
39
 
40
  Join examples
 
41
  ```python
42
  from datasets import load_dataset
43
  art = load_dataset("openmed-community/multicare-articles", split="train")
@@ -49,4 +54,5 @@ print(article["title"]) # matching article
49
  ```
50
 
51
  Notes
 
52
  - Use article-level splits to avoid leakage when combining with images/cases.
 
1
+ ---
2
  pretty_name: MultiCaRe Articles
3
  license: cc-by-4.0
4
  task_categories:
 
7
  language:
8
  - en
9
  size_categories:
10
+ - 100K<n<1M
11
+ ---
12
 
13
  # MultiCaRe: Open-Source Clinical Case Dataset
14
 
 
17
  - Source and process: parse PMC OA case reports; extract metadata/abstracts; download/process figures; align captions; build a hierarchical taxonomy for image labels.
18
  - Scale: 85k+ OA articles, 160k+ images (v2.0).
19
  - Tasks: article-level retrieval/classification, summarization; joins to cases/images for multimodal tasks.
20
+ - Citation: MDPI DATA paper — <https://www.mdpi.com/2306-5729/10/8/123>; Zenodo — <https://zenodo.org/records/13936721>.
21
 
22
  This repository: per-article dataset
23
  Per-article dataset with bibliographic metadata and abstracts (one file: articles.parquet).
24
 
25
  Schema
26
+
27
  - article_id: PMCID (primary key)
28
  - title, journal, year
29
  - doi, pmid, pmcid
 
32
  - abstract: article abstract
33
 
34
  Quick start
35
+
36
  ```python
37
  from datasets import load_dataset
38
  art = load_dataset("openmed-community/multicare-articles", split="train")
39
  row = art[0]
40
+ print(row["title"])
41
  print(row["abstract"][:600])
42
  ```
43
 
44
  Join examples
45
+
46
  ```python
47
  from datasets import load_dataset
48
  art = load_dataset("openmed-community/multicare-articles", split="train")
 
54
  ```
55
 
56
  Notes
57
+
58
  - Use article-level splits to avoid leakage when combining with images/cases.